Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-1333P-201ENST00000516162 93 ntBASIC2.08□□□□□ -2.08
ERCC3P19447 SNORD38B-202ENST00000625943 69 ntBASIC2.08□□□□□ -2.08
ERCC3P19447 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ERCC3P19447 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.08□□□□□ -2.08
ERCC3P19447 SNORA22.1-201ENST00000362701 134 ntBASIC2.07□□□□□ -2.08
ERCC3P19447 SNORA31.2-201ENST00000516019 134 ntBASIC2.07□□□□□ -2.08
ERCC3P19447 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.07□□□□□ -2.08
ERCC3P19447 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ERCC3P19447 MIR378A-201ENST00000362177 66 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 RNA5SP264-201ENST00000363115 107 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 Y_RNA.330-201ENST00000365230 109 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 RNU6-396P-201ENST00000365369 105 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 Y_RNA.525-201ENST00000384570 113 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 BTF3P4-201ENST00000418852 495 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 AC008267.6-201ENST00000441664 139 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 RNU6-893P-201ENST00000458841 100 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 RNU1-98P-201ENST00000458992 160 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 snoU13.31-201ENST00000607291 104 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 AL365222.1-201ENST00000614661 98 ntBASIC2.06□□□□□ -2.08
ERCC3P19447 Y_RNA.354-201ENST00000365448 111 ntBASIC2.05□□□□□ -2.08
ERCC3P19447 AC090844.1-201ENST00000422019 156 ntBASIC2.05□□□□□ -2.08
ERCC3P19447 snoU13.25-201ENST00000458945 104 ntBASIC2.05□□□□□ -2.08
ERCC3P19447 RNU6-772P-201ENST00000516042 105 ntBASIC2.05□□□□□ -2.08
ERCC3P19447 RNU6-781P-201ENST00000516377 101 ntBASIC2.05□□□□□ -2.08
ERCC3P19447 MIR8055-201ENST00000610739 97 ntBASIC2.05□□□□□ -2.08
ERCC3P19447 Y_RNA.261-201ENST00000364631 102 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 SNORD116-14-201ENST00000383894 92 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 SNORD116-17-201ENST00000383929 92 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 SNORD116-15-201ENST00000384445 92 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 SNORD116-19-201ENST00000384729 92 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 RNA5SP144-201ENST00000410846 116 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 RNU7-113P-201ENST00000459273 62 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 RN7SKP179-201ENST00000516126 217 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 RNY4P20-201ENST00000516678 93 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 IGKV1-22-201ENST00000524313 326 ntBASIC2.04□□□□□ -2.08
ERCC3P19447 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.04□□□□□ -2.08
ERCC3P19447 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ERCC3P19447 RNU6-22P-201ENST00000384355 107 ntBASIC2.03□□□□□ -2.08
ERCC3P19447 RNU6-1154P-201ENST00000391001 104 ntBASIC2.03□□□□□ -2.08
ERCC3P19447 SNORA26.6-201ENST00000391256 115 ntBASIC2.03□□□□□ -2.08
ERCC3P19447 RNU4-62P-201ENST00000410125 130 ntBASIC2.03□□□□□ -2.08
ERCC3P19447 Y_RNA.127-201ENST00000363386 109 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 Y_RNA.171-201ENST00000363760 102 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 Y_RNA.298-201ENST00000364960 107 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 Y_RNA.528-201ENST00000384575 108 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 RNU6-1237P-201ENST00000384777 107 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 MIR759-201ENST00000390224 91 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 RNU6-602P-201ENST00000411155 105 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 RNU7-123P-201ENST00000515911 60 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 MIR4303-201ENST00000581299 66 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 MIR4781-201ENST00000585250 76 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 AP000753.3-201ENST00000604083 169 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 PRELID3BP2-201ENST00000605362 201 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 AC025166.1-201ENST00000612411 163 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 Z97988.1-201ENST00000637697 135 ntBASIC2.02□□□□□ -2.09
ERCC3P19447 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.02□□□□□ -2.09
ERCC3P19447 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 SNORD58C-201ENST00000365223 64 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 MIR222-201ENST00000384992 110 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 RNU6-313P-201ENST00000516317 112 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 RNU2-35P-201ENST00000516446 142 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 MIR2115-201ENST00000516657 100 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
ERCC3P19447 Y_RNA.280-201ENST00000364765 112 ntBASIC2□□□□□ -2.09
ERCC3P19447 RNU6-205P-201ENST00000390858 107 ntBASIC2□□□□□ -2.09
ERCC3P19447 MIR1185-1-201ENST00000408598 86 ntBASIC2□□□□□ -2.09
ERCC3P19447 AP1B1P2-201ENST00000416196 106 ntBASIC2□□□□□ -2.09
ERCC3P19447 AL512326.2-201ENST00000426359 151 ntBASIC2□□□□□ -2.09
ERCC3P19447 AL359881.1-201ENST00000602916 267 ntBASIC2□□□□□ -2.09
ERCC3P19447 MIR502-201ENST00000606349 86 ntBASIC2□□□□□ -2.09
ERCC3P19447 RNU6-910P-201ENST00000390844 107 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 SNORA67.5-201ENST00000391036 107 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 Y_RNA.617-201ENST00000410920 90 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 POLR2J4-204ENST00000418424 324 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 RNA5SP33-201ENST00000516687 98 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 AC004812.1-201ENST00000540773 146 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 MIR4419B-201ENST00000577260 68 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.99□□□□□ -2.09
ERCC3P19447 SNORD12C-201ENST00000386307 89 ntBASIC1.98□□□□□ -2.09
ERCC3P19447 RNU6-1054P-201ENST00000411293 104 ntBASIC1.98□□□□□ -2.09
ERCC3P19447 Y_RNA.430-201ENST00000384081 110 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 RNU6-997P-201ENST00000384725 107 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 MIR1302-7-201ENST00000408841 72 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 RNA5SP95-201ENST00000410319 137 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 RNA5SP237-201ENST00000410414 113 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 RNA5SP136-201ENST00000410906 107 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 Y_RNA.630-201ENST00000411370 108 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 RNU6-659P-201ENST00000516454 104 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 MIR6516-201ENST00000630554 81 ntBASIC1.97□□□□□ -2.09
ERCC3P19447 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ERCC3P19447 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.09
ERCC3P19447 RNU6-654P-201ENST00000364373 107 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 Y_RNA.346-201ENST00000365385 112 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 RNU6-1081P-201ENST00000384537 107 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 Y_RNA.531-201ENST00000384589 121 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 RNU2-51P-201ENST00000410708 197 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 RNU6-321P-201ENST00000410912 106 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 SNORA70.22-201ENST00000517160 124 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 AC022523.2-201ENST00000561045 150 ntBASIC1.96□□□□□ -2.1
ERCC3P19447 Y_RNA.213-201ENST00000364178 111 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms