Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
NID1P14543 RNU6-1094P-201ENST00000362416 104 ntBASIC2.55□□□□□ -2
NID1P14543 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
NID1P14543 AC105272.1-201ENST00000438604 198 ntBASIC2.55□□□□□ -2
NID1P14543 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
NID1P14543 SNORA25.13-201ENST00000516395 103 ntBASIC2.55□□□□□ -2
NID1P14543 RNU7-153P-201ENST00000516455 62 ntBASIC2.55□□□□□ -2
NID1P14543 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
NID1P14543 MIR3162-201ENST00000581818 82 ntBASIC2.55□□□□□ -2
NID1P14543 AP006437.1-201ENST00000641440 3685 ntBASIC2.55□□□□□ -2
NID1P14543 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.55□□□□□ -2
NID1P14543 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
NID1P14543 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NID1P14543 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
NID1P14543 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
NID1P14543 AC087499.7-201ENST00000441958 109 ntBASIC2.54□□□□□ -2
NID1P14543 RNU7-43P-201ENST00000516554 64 ntBASIC2.54□□□□□ -2
NID1P14543 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.54□□□□□ -2
NID1P14543 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
NID1P14543 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NID1P14543 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
NID1P14543 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.54□□□□□ -2
NID1P14543 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
NID1P14543 RNU4-32P-201ENST00000363404 141 ntBASIC2.53□□□□□ -2
NID1P14543 AL023284.1-201ENST00000403956 276 ntBASIC2.53□□□□□ -2
NID1P14543 AC104389.3-201ENST00000445629 235 ntBASIC2.53□□□□□ -2
NID1P14543 AC114801.3-201ENST00000510231 177 ntBASIC2.53□□□□□ -2
NID1P14543 RNA5SP437-201ENST00000517249 129 ntBASIC2.53□□□□□ -2
NID1P14543 AC133485.1-201ENST00000567176 124 ntBASIC2.53□□□□□ -2
NID1P14543 MIR4435-1-201ENST00000582552 80 ntBASIC2.53□□□□□ -2
NID1P14543 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
NID1P14543 AC008133.2-201ENST00000624540 351 ntBASIC2.53□□□□□ -2
NID1P14543 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NID1P14543 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.52□□□□□ -2.01
NID1P14543 HSBP1P2-201ENST00000299671 229 ntBASIC2.52□□□□□ -2.01
NID1P14543 RNA5SP133-201ENST00000363368 119 ntBASIC2.52□□□□□ -2.01
NID1P14543 RNU6-478P-201ENST00000363904 110 ntBASIC2.52□□□□□ -2.01
NID1P14543 RNU6-1237P-201ENST00000384777 107 ntBASIC2.52□□□□□ -2.01
NID1P14543 snoU13.27-201ENST00000459278 104 ntBASIC2.52□□□□□ -2.01
NID1P14543 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.51□□□□□ -2.01
NID1P14543 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
NID1P14543 Y_RNA.57-201ENST00000362806 113 ntBASIC2.51□□□□□ -2.01
NID1P14543 RNY1P13-201ENST00000365030 105 ntBASIC2.51□□□□□ -2.01
NID1P14543 RNU6-590P-201ENST00000365039 107 ntBASIC2.51□□□□□ -2.01
NID1P14543 RNA5SP184-201ENST00000411071 108 ntBASIC2.51□□□□□ -2.01
NID1P14543 RNA5SP508-201ENST00000411327 119 ntBASIC2.51□□□□□ -2.01
NID1P14543 AC004223.1-201ENST00000479840 271 ntBASIC2.51□□□□□ -2.01
NID1P14543 RN7SL499P-201ENST00000481141 276 ntBASIC2.51□□□□□ -2.01
NID1P14543 AC099513.1-201ENST00000490423 301 ntBASIC2.51□□□□□ -2.01
NID1P14543 RPS29P11-201ENST00000496507 171 ntBASIC2.51□□□□□ -2.01
NID1P14543 RNVU1-2-201ENST00000516326 135 ntBASIC2.51□□□□□ -2.01
NID1P14543 RNA5SP481-201ENST00000516814 122 ntBASIC2.51□□□□□ -2.01
NID1P14543 MIR8066-201ENST00000617280 78 ntBASIC2.51□□□□□ -2.01
NID1P14543 MIR6733-201ENST00000635723 61 ntBASIC2.51□□□□□ -2.01
NID1P14543 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.51□□□□□ -2.01
NID1P14543 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NID1P14543 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
NID1P14543 AL138827.1-201ENST00000402666 306 ntBASIC2.5□□□□□ -2.01
NID1P14543 RNA5SP237-201ENST00000410414 113 ntBASIC2.5□□□□□ -2.01
NID1P14543 Z98742.3-201ENST00000418637 326 ntBASIC2.5□□□□□ -2.01
NID1P14543 AL450471.1-201ENST00000447509 127 ntBASIC2.5□□□□□ -2.01
NID1P14543 SNORD4B-201ENST00000459083 72 ntBASIC2.5□□□□□ -2.01
NID1P14543 MIR4764-201ENST00000580680 88 ntBASIC2.5□□□□□ -2.01
NID1P14543 AP000753.3-201ENST00000604083 169 ntBASIC2.5□□□□□ -2.01
NID1P14543 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.5□□□□□ -2.01
NID1P14543 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NID1P14543 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NID1P14543 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NID1P14543 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NID1P14543 MIR424-201ENST00000362227 98 ntBASIC2.49□□□□□ -2.01
NID1P14543 RNU6-624P-201ENST00000363411 107 ntBASIC2.49□□□□□ -2.01
NID1P14543 SNORD38B-201ENST00000384690 67 ntBASIC2.49□□□□□ -2.01
NID1P14543 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
NID1P14543 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
NID1P14543 MIR1283-2-201ENST00000408621 87 ntBASIC2.49□□□□□ -2.01
NID1P14543 RNU6-380P-201ENST00000410207 107 ntBASIC2.49□□□□□ -2.01
NID1P14543 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
NID1P14543 HMGN2P3-201ENST00000433603 273 ntBASIC2.49□□□□□ -2.01
NID1P14543 HMGN2P5-201ENST00000436882 273 ntBASIC2.49□□□□□ -2.01
NID1P14543 RNA5SP137-201ENST00000516833 135 ntBASIC2.49□□□□□ -2.01
NID1P14543 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.49□□□□□ -2.01
NID1P14543 SNORD38B-202ENST00000625943 69 ntBASIC2.49□□□□□ -2.01
NID1P14543 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NID1P14543 RNU1-112P-201ENST00000364401 164 ntBASIC2.48□□□□□ -2.01
NID1P14543 RNU1-148P-201ENST00000384472 162 ntBASIC2.48□□□□□ -2.01
NID1P14543 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
NID1P14543 SNORA48.1-201ENST00000390879 135 ntBASIC2.48□□□□□ -2.01
NID1P14543 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
NID1P14543 snoU13.11-201ENST00000459219 104 ntBASIC2.48□□□□□ -2.01
NID1P14543 SUB1P4-201ENST00000566062 339 ntBASIC2.48□□□□□ -2.01
NID1P14543 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.48□□□□□ -2.01
NID1P14543 VTRNA1-1-201ENST00000363120 99 ntBASIC2.47□□□□□ -2.01
NID1P14543 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
NID1P14543 RNY1P2-201ENST00000364820 117 ntBASIC2.47□□□□□ -2.01
NID1P14543 MIR520C-201ENST00000385005 87 ntBASIC2.47□□□□□ -2.01
NID1P14543 HMGN2P35-201ENST00000412164 270 ntBASIC2.47□□□□□ -2.01
NID1P14543 AC027119.1-201ENST00000440877 241 ntBASIC2.47□□□□□ -2.01
NID1P14543 AC141846.1-201ENST00000568348 142 ntBASIC2.47□□□□□ -2.01
NID1P14543 MIR548AO-201ENST00000579992 96 ntBASIC2.47□□□□□ -2.01
NID1P14543 AL512598.1-201ENST00000610158 273 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms