Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SNORA63.4-201ENST00000362763 126 ntBASIC1.91□□□□□ -2.1
COL6A2P12110 SNORD12C-201ENST00000386307 89 ntBASIC1.91□□□□□ -2.1
COL6A2P12110 RNU6-1190P-201ENST00000410811 104 ntBASIC1.91□□□□□ -2.1
COL6A2P12110 RPS3AP1-201ENST00000413190 320 ntBASIC1.91□□□□□ -2.1
COL6A2P12110 RNU6-1258P-201ENST00000516911 111 ntBASIC1.91□□□□□ -2.1
COL6A2P12110 AL357312.1-201ENST00000603879 298 ntBASIC1.91□□□□□ -2.1
COL6A2P12110 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
COL6A2P12110 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL6A2P12110 MIR302D-201ENST00000362275 68 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 RNU6-1107P-201ENST00000364817 104 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 Y_RNA.362-201ENST00000365518 110 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 Y_RNA.549-201ENST00000384657 102 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 MIR548D2-201ENST00000384955 97 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 MIR30A-201ENST00000385092 71 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 RNU7-113P-201ENST00000459273 62 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 RPL39P34-201ENST00000477141 156 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 RNA5SP458-201ENST00000516188 119 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 GHRLOS.1-201ENST00000610995 70 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 AL353997.5-201ENST00000618886 171 ntBASIC1.9□□□□□ -2.11
COL6A2P12110 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
COL6A2P12110 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A2P12110 AL589743.1-201ENST00000551932 2712 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 Y_RNA.171-201ENST00000363760 102 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 AC113410.1-201ENST00000505029 247 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 RNU7-41P-201ENST00000515917 61 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 RNU6-94P-201ENST00000607728 107 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 MIR4251-201ENST00000635819 61 ntBASIC1.89□□□□□ -2.11
COL6A2P12110 Y_RNA.49-201ENST00000362714 112 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 SNORA1.1-201ENST00000364671 133 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 Y_RNA.323-201ENST00000365157 109 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 Y_RNA.354-201ENST00000365448 111 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 HMGN2P23-201ENST00000456759 269 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 snoU13.9-201ENST00000458927 103 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.88□□□□□ -2.11
COL6A2P12110 AL035470.1-201ENST00000622571 220 ntBASIC1.88□□□□□ -2.11
COL6A2P12110 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A2P12110 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL6A2P12110 SNORD33-201ENST00000362761 85 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 RNA5SP48-201ENST00000363969 126 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 RNU4-69P-201ENST00000410677 143 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 RNU6-922P-201ENST00000516753 99 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A2P12110 MIR548AO-201ENST00000579992 96 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 AC087741.2-201ENST00000619415 172 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
COL6A2P12110 SNORD1A-201ENST00000364968 72 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 Y_RNA.344-201ENST00000365381 112 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 RNU6-106P-201ENST00000384405 107 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 HMGN1P33-201ENST00000432945 451 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 SNORD111.1-201ENST00000516421 86 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 RNU7-6P-201ENST00000516845 62 ntBASIC1.86□□□□□ -2.11
COL6A2P12110 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
COL6A2P12110 SNORD115-19-201ENST00000363098 82 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 Y_RNA.116-201ENST00000363292 103 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 SNORD115-18-201ENST00000363293 82 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 SNORD115-17-201ENST00000364612 82 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 Y_RNA.470-201ENST00000384307 117 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 RNU6-602P-201ENST00000411155 105 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 MIR3198-2-201ENST00000577868 80 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 MIR3192-201ENST00000584920 77 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 MIR8065-201ENST00000620577 100 ntBASIC1.85□□□□□ -2.11
COL6A2P12110 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL6A2P12110 SNORA63.5-201ENST00000363548 123 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 RNU6-1014P-201ENST00000383940 103 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 RNU6-147P-201ENST00000383983 107 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL6A2P12110 AC009474.2-201ENST00000451383 136 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 AC005908.1-201ENST00000468701 347 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 RNA5SP33-201ENST00000516687 98 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 AC068339.1-201ENST00000526965 141 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 SNRPGP19-201ENST00000603826 189 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 AL096861.1-201ENST00000610899 123 ntBASIC1.84□□□□□ -2.11
COL6A2P12110 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.12
COL6A2P12110 Y_RNA.309-201ENST00000365046 111 ntBASIC1.83□□□□□ -2.12
COL6A2P12110 MIR5009-201ENST00000578736 100 ntBASIC1.83□□□□□ -2.12
COL6A2P12110 MIR8063-201ENST00000621930 81 ntBASIC1.83□□□□□ -2.12
COL6A2P12110 AL162726.3-218ENST00000636401 95 ntBASIC1.83□□□□□ -2.12
COL6A2P12110 U8.6-201ENST00000364939 135 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 MIR1912-201ENST00000410389 80 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 AC027119.1-201ENST00000440877 241 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 AL133373.1-201ENST00000497098 94 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 AC079140.2-201ENST00000506193 142 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 CYP3A52P-201ENST00000563326 91 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 MIR3613-201ENST00000579844 87 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 MIR548AE2-201ENST00000583456 67 ntBASIC1.82□□□□□ -2.12
COL6A2P12110 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL6A2P12110 Y_RNA.4-201ENST00000362333 112 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 Y_RNA.164-201ENST00000363709 102 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 Y_RNA.338-201ENST00000365320 114 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 SNORD38B-201ENST00000384690 67 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 RNU6-554P-201ENST00000410466 106 ntBASIC1.81□□□□□ -2.12
COL6A2P12110 AL031737.1-201ENST00000450125 223 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms