Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.590-201ENST00000410140 107 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-985P-201ENST00000410182 104 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-651P-201ENST00000411040 105 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 SNORD2.1-201ENST00000458762 69 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 RNU7-80P-201ENST00000459562 61 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 AC133485.4-201ENST00000561835 220 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 MIR3129-201ENST00000581095 76 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 AL356055.1-201ENST00000602528 446 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 U2.14-201ENST00000615943 113 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 MIR376A2-201ENST00000636782 80 ntBASIC0.18□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.82-201ENST00000363000 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.92-201ENST00000363043 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.235-201ENST00000364412 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.306-201ENST00000365015 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.312-201ENST00000365089 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.322-201ENST00000365151 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-639P-201ENST00000384074 107 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.454-201ENST00000384224 113 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 SNORA8.2-201ENST00000384372 139 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.542-201ENST00000384641 111 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-713P-201ENST00000384761 107 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.650-201ENST00000459002 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.679-201ENST00000516416 91 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.777-201ENST00000516982 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 MIR5197-201ENST00000583721 112 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.771-201ENST00000598668 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 AL662814.1-201ENST00000617364 121 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.789-201ENST00000622480 102 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 AL596211.1-201ENST00000569873 2277 ntBASIC0.17□□□□□ -2.38
IGHV3-43DP0DP04 Y_RNA.116-201ENST00000363292 103 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 SNORA33.2-201ENST00000365413 134 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 SNORA79-201ENST00000408376 140 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-469P-201ENST00000516253 101 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 MIR3152-201ENST00000579801 74 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 MIR5093-201ENST00000583199 100 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 MIR8066-201ENST00000617280 78 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 AC091932.4-201ENST00000623386 200 ntBASIC0.16□□□□□ -2.38
IGHV3-43DP0DP04 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.42-201ENST00000362660 108 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-597P-201ENST00000365620 102 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 SNORA20-201ENST00000384662 132 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.617-201ENST00000410920 90 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.618-201ENST00000410949 107 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 AP003327.1-201ENST00000529684 127 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 MIR6515-201ENST00000619843 57 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 AL365265.1-201ENST00000621045 234 ntBASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.15□□□□□ -2.39
IGHV3-43DP0DP04 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-403P-201ENST00000363163 104 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-728P-201ENST00000365375 104 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.430-201ENST00000384081 110 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-1109P-201ENST00000391187 107 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-381P-201ENST00000391259 108 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 SEPT7P4-201ENST00000437076 306 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-561P-201ENST00000516222 102 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 RNU7-70P-201ENST00000516941 66 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 AL442663.2-201ENST00000554385 511 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.13-201ENST00000362403 112 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.176-201ENST00000363815 109 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 RNU4-17P-201ENST00000365598 141 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-1292P-201ENST00000383856 107 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.512-201ENST00000384518 102 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 MIR644A-201ENST00000385262 94 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 AL512326.2-201ENST00000426359 151 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 MIR4431-201ENST00000579990 94 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 AL589743.1-201ENST00000551932 2712 ntBASIC0.13□□□□□ -2.39
IGHV3-43DP0DP04 MIR335-201ENST00000362173 94 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-797P-201ENST00000363101 109 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 U8.15-201ENST00000390947 134 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 AC141846.1-201ENST00000568348 142 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 MIR4282-201ENST00000583613 67 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 AL365205.2-201ENST00000594586 68 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 MIR6082-201ENST00000613604 109 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 AC078938.1-201ENST00000620993 318 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 U6.104-201ENST00000637979 90 ntBASIC0.12□□□□□ -2.39
IGHV3-43DP0DP04 SNORA22.1-201ENST00000362701 134 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.122-201ENST00000363331 96 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.416-201ENST00000384014 113 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 SNORA72.6-201ENST00000384520 129 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 MTCYBP6-201ENST00000441810 138 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-863P-201ENST00000515989 104 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 RNU6-635P-201ENST00000516651 102 ntBASIC0.11□□□□□ -2.39
IGHV3-43DP0DP04 Y_RNA.701-201ENST00000516812 110 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms