Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL669831.3-213ENST00000636676 183 ntBASIC-1.54□□□□□ -2.66
TPM3P06753 MTND5P32-201ENST00000560711 1802 ntBASIC-1.54□□□□□ -2.66
TPM3P06753 RNU6-21P-201ENST00000384710 107 ntBASIC-1.55□□□□□ -2.66
TPM3P06753 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.55□□□□□ -2.66
TPM3P06753 RNU7-74P-201ENST00000459104 62 ntBASIC-1.55□□□□□ -2.66
TPM3P06753 AC021146.6-201ENST00000514659 117 ntBASIC-1.55□□□□□ -2.66
TPM3P06753 MIR4473-201ENST00000583731 91 ntBASIC-1.55□□□□□ -2.66
TPM3P06753 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.55□□□□□ -2.66
TPM3P06753 MIR376A2-201ENST00000636782 80 ntBASIC-1.55□□□□□ -2.66
TPM3P06753 RNU1-141P-201ENST00000364623 158 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 MIR604-201ENST00000384880 94 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 AL603914.1-201ENST00000401964 204 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 RNU6-191P-201ENST00000516295 94 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 MIR3920-201ENST00000581751 86 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 AC013791.1-201ENST00000616619 62 ntBASIC-1.56□□□□□ -2.66
TPM3P06753 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 SNORD114-29-201ENST00000364819 70 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 RNY1P2-201ENST00000364820 117 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 SNORD63-201ENST00000384262 68 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 MIR599-201ENST00000385069 95 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 MT-TQ-201ENST00000387372 72 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 MTND1P14-201ENST00000427400 950 ntBASIC-1.57□□□□□ -2.66
TPM3P06753 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.57□□□□□ -2.66
TPM3P06753 RNU4-70P-201ENST00000384579 139 ntBASIC-1.58□□□□□ -2.66
TPM3P06753 MIR204-201ENST00000385200 110 ntBASIC-1.58□□□□□ -2.66
TPM3P06753 RNU7-35P-201ENST00000517174 62 ntBASIC-1.58□□□□□ -2.66
TPM3P06753 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.58□□□□□ -2.66
TPM3P06753 RNY3-201ENST00000365484 102 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 MIR9-2-201ENST00000384838 87 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 RNU6-510P-201ENST00000391239 108 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 RNU6-175P-201ENST00000516896 107 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 AC098479.1-201ENST00000609225 154 ntBASIC-1.59□□□□□ -2.66
TPM3P06753 RNU4-73P-201ENST00000363164 141 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 MIR224-201ENST00000384889 81 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 AC097635.1-201ENST00000450678 155 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 RNU6-893P-201ENST00000458841 100 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 MIR5197-201ENST00000583721 112 ntBASIC-1.6□□□□□ -2.67
TPM3P06753 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 RNY4P14-201ENST00000363656 96 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 MIR635-201ENST00000384830 98 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 RNU6-314P-201ENST00000516574 104 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 AC069503.3-201ENST00000618674 145 ntBASIC-1.61□□□□□ -2.67
TPM3P06753 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.62□□□□□ -2.67
TPM3P06753 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.62□□□□□ -2.67
TPM3P06753 RNU6-429P-201ENST00000384582 108 ntBASIC-1.62□□□□□ -2.67
TPM3P06753 AL445193.1-201ENST00000441183 141 ntBASIC-1.62□□□□□ -2.67
TPM3P06753 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.62□□□□□ -2.67
TPM3P06753 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.62□□□□□ -2.67
TPM3P06753 MIR539-201ENST00000365690 78 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 RNU6-937P-201ENST00000384325 106 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 TRAJ51-201ENST00000504127 63 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 RNU6-764P-201ENST00000516396 105 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 RNU6-506P-201ENST00000516553 94 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 MIR5692C2-201ENST00000577959 77 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 VN1R91P-201ENST00000594377 169 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.63□□□□□ -2.67
TPM3P06753 MTND3P8-201ENST00000412909 339 ntBASIC-1.64□□□□□ -2.67
TPM3P06753 AC096644.2-201ENST00000429278 159 ntBASIC-1.64□□□□□ -2.67
TPM3P06753 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.64□□□□□ -2.67
TPM3P06753 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.64□□□□□ -2.67
TPM3P06753 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.64□□□□□ -2.67
TPM3P06753 RNU7-13P-201ENST00000516413 62 ntBASIC-1.64□□□□□ -2.67
TPM3P06753 MIR4636-201ENST00000582271 80 ntBASIC-1.64□□□□□ -2.67
TPM3P06753 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.65□□□□□ -2.67
TPM3P06753 RNU6-881P-201ENST00000516813 102 ntBASIC-1.65□□□□□ -2.67
TPM3P06753 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.65□□□□□ -2.67
TPM3P06753 MIR3681-201ENST00000580089 72 ntBASIC-1.65□□□□□ -2.67
TPM3P06753 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 RNU6-484P-201ENST00000384016 107 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 MIR526A2-201ENST00000390198 65 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 RNU2-55P-201ENST00000411146 174 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 MTND1P34-201ENST00000438556 671 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 RNA5SP153-201ENST00000516498 76 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 MTND5P40-201ENST00000559945 246 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 YWHAEP2-201ENST00000580066 112 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 AC097639.2-201ENST00000603159 172 ntBASIC-1.66□□□□□ -2.68
TPM3P06753 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 RNU6-900P-201ENST00000384498 102 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 SNORD56B-201ENST00000384713 71 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 RNY1P7-201ENST00000384743 110 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.67□□□□□ -2.68
TPM3P06753 SNORA13-201ENST00000458790 133 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 SEPT14P8-201ENST00000508026 178 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 AC074198.2-201ENST00000508153 258 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 RNU7-137P-201ENST00000516788 62 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 C8orf59P2-201ENST00000603441 271 ntBASIC-1.67□□□□□ -2.68
TPM3P06753 SNORD113-5-201ENST00000607261 78 ntBASIC-1.67□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 173.9 ms