Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DOAP06340 Y_RNA.116-201ENST00000363292 103 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 Y_RNA.198-201ENST00000364013 98 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 Y_RNA.454-201ENST00000384224 113 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 SNORD12C-201ENST00000386307 89 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 RNA5SP144-201ENST00000410846 116 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 MIR3613-201ENST00000579844 87 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 AL359821.1-201ENST00000605519 182 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 AC243994.1-201ENST00000618627 109 ntBASIC1.8□□□□□ -2.12
HLA-DOAP06340 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DOAP06340 RNU6-1107P-201ENST00000364817 104 ntBASIC1.79□□□□□ -2.12
HLA-DOAP06340 Y_RNA.344-201ENST00000365381 112 ntBASIC1.79□□□□□ -2.12
HLA-DOAP06340 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HLA-DOAP06340 POLR2J4-204ENST00000418424 324 ntBASIC1.79□□□□□ -2.12
HLA-DOAP06340 JTBP1-201ENST00000441314 247 ntBASIC1.79□□□□□ -2.12
HLA-DOAP06340 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.79□□□□□ -2.12
HLA-DOAP06340 RNU1-92P-201ENST00000517017 135 ntBASIC1.79□□□□□ -2.12
HLA-DOAP06340 MIR4713-201ENST00000582691 75 ntBASIC1.79□□□□□ -2.12
HLA-DOAP06340 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 Y_RNA.362-201ENST00000365518 110 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 RNA5SP259-201ENST00000365541 109 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 RNU6-106P-201ENST00000384405 107 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 SNORA26.6-201ENST00000391256 115 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 RNU6-554P-201ENST00000410466 106 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 RNU6-321P-201ENST00000410912 106 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 AL161935.2-201ENST00000414627 60 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.78□□□□□ -2.12
HLA-DOAP06340 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.77□□□□□ -2.13
HLA-DOAP06340 Y_RNA.85-201ENST00000363014 111 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 Y_RNA.281-201ENST00000364774 94 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 SNORA1.2-201ENST00000365189 134 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 MIR1304-201ENST00000408243 91 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 RPS29P29-201ENST00000456396 171 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 AC005908.1-201ENST00000468701 347 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 SNORA74.3-201ENST00000517108 154 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 AC004812.1-201ENST00000540773 146 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 AC103810.8-201ENST00000607347 118 ntBASIC1.77□□□□□ -2.13
HLA-DOAP06340 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 RNU6-1123P-201ENST00000362347 106 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 SNORA24-201ENST00000384096 131 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 Y_RNA.470-201ENST00000384307 117 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 MIR513A1-201ENST00000385138 129 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DOAP06340 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 AL356379.1-201ENST00000414105 126 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 AL354695.1-201ENST00000427935 228 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 AC107297.1-201ENST00000459991 176 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 RNU7-6P-201ENST00000516845 62 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DOAP06340 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DOAP06340 MIR4781-201ENST00000585250 76 ntBASIC1.76□□□□□ -2.13
HLA-DOAP06340 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DOAP06340 MIR337-201ENST00000362281 93 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 RNU6-1298P-201ENST00000362456 101 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 Y_RNA.213-201ENST00000364178 111 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 RNA5SP89-201ENST00000410300 108 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 AC090844.1-201ENST00000422019 156 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 MIR1270-201ENST00000459320 83 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 RPS27P21-201ENST00000486977 252 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 TRMT112P2-201ENST00000512910 132 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 RNU7-41P-201ENST00000515917 61 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 MIR4764-201ENST00000580680 88 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 MIR6717-201ENST00000622747 73 ntBASIC1.75□□□□□ -2.13
HLA-DOAP06340 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DOAP06340 RNY1P10-201ENST00000363268 113 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 RNU6-1319P-201ENST00000390855 104 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 RNU6-747P-201ENST00000390928 104 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 RNU6-241P-201ENST00000391148 104 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 SNORA19.1-201ENST00000410656 129 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 RNU6-177P-201ENST00000411257 104 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.74□□□□□ -2.13
HLA-DOAP06340 RNU6-922P-201ENST00000516753 99 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 AL020996.3-201ENST00000606617 222 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 Y_RNA.773-201ENST00000607168 90 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 AC087741.2-201ENST00000619415 172 ntBASIC1.74□□□□□ -2.13
HLA-DOAP06340 SNORA22.1-201ENST00000362701 134 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 SNORA7.1-201ENST00000363750 139 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 SNORA51.10-201ENST00000384418 136 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 Y_RNA.531-201ENST00000384589 121 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 MIR548D2-201ENST00000384955 97 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 SNORD41-201ENST00000386967 70 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 RPL39P34-201ENST00000477141 156 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 AL627230.6-201ENST00000611129 280 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 MIR8063-201ENST00000621930 81 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 AC008133.2-201ENST00000624540 351 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 MIR1255B1-201ENST00000636325 63 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 MIR6841-201ENST00000637129 72 ntBASIC1.73□□□□□ -2.13
HLA-DOAP06340 RNY4P6-201ENST00000363667 96 ntBASIC1.72□□□□□ -2.13
HLA-DOAP06340 RNU6-1014P-201ENST00000383940 103 ntBASIC1.72□□□□□ -2.13
HLA-DOAP06340 MIR520C-201ENST00000385005 87 ntBASIC1.72□□□□□ -2.13
HLA-DOAP06340 MIR653-201ENST00000385279 96 ntBASIC1.72□□□□□ -2.13
HLA-DOAP06340 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms