Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 AL359821.1-201ENST00000605519 182 ntBASIC1.93□□□□□ -2.1
ITGB1P05556 SNORD115-40-201ENST00000606510 82 ntBASIC1.93□□□□□ -2.1
ITGB1P05556 RNU6-94P-201ENST00000607728 107 ntBASIC1.93□□□□□ -2.1
ITGB1P05556 MIR302B-201ENST00000362188 73 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 MIR337-201ENST00000362281 93 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 RNU6-640P-201ENST00000363693 105 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 SNORA67.5-201ENST00000391036 107 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 SNORA19.1-201ENST00000410656 129 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 RNA5SP144-201ENST00000410846 116 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 AL512326.2-201ENST00000426359 151 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 AL035398.1-201ENST00000430869 322 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 AC068339.1-201ENST00000526965 141 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
ITGB1P05556 MIR526A1-201ENST00000384897 85 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 RNU6-109P-201ENST00000516364 107 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 RNU6-184P-201ENST00000516514 107 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 RNU7-6P-201ENST00000516845 62 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 MIR3163-201ENST00000581592 73 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 AL513534.2-201ENST00000603836 250 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 MIR8070-201ENST00000616510 88 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 AP001318.4-201ENST00000616637 121 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 AC021613.1-201ENST00000623880 111 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 SNORD3E-202ENST00000627253 216 ntBASIC1.91□□□□□ -2.1
ITGB1P05556 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.9□□□□□ -2.11
ITGB1P05556 RNU6-1123P-201ENST00000362347 106 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 RNU6-203P-201ENST00000384038 104 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 MIR194-1-201ENST00000384892 85 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 MIR590-201ENST00000385008 97 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ITGB1P05556 SNORD28B-201ENST00000390993 75 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 AL161935.2-201ENST00000414627 60 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 TRMT112P2-201ENST00000512910 132 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
ITGB1P05556 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
ITGB1P05556 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
ITGB1P05556 RNY1P10-201ENST00000363268 113 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 Y_RNA.370-201ENST00000365589 108 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 POLR2J4-204ENST00000418424 324 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 RNA5SP57-201ENST00000459463 123 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.89□□□□□ -2.11
ITGB1P05556 RNU6-958P-201ENST00000516995 106 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 AC004812.1-201ENST00000540773 146 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 AC095038.3-201ENST00000634439 195 ntBASIC1.89□□□□□ -2.11
ITGB1P05556 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ITGB1P05556 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
ITGB1P05556 Y_RNA.369-201ENST00000365568 117 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 MIR136-201ENST00000385207 82 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 RNU6-1190P-201ENST00000410811 104 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 AL022718.1-201ENST00000412004 84 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 AC107297.1-201ENST00000459991 176 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 RNU6-1258P-201ENST00000516911 111 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 AC141557.1-201ENST00000540982 400 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 DNAJC19P9-201ENST00000555084 351 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 MIR548AR-201ENST00000582191 57 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 MIR502-201ENST00000606349 86 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 AC087741.2-201ENST00000619415 172 ntBASIC1.88□□□□□ -2.11
ITGB1P05556 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
ITGB1P05556 Y_RNA.171-201ENST00000363760 102 ntBASIC1.87□□□□□ -2.11
ITGB1P05556 SNORA1.2-201ENST00000365189 134 ntBASIC1.87□□□□□ -2.11
ITGB1P05556 Y_RNA.531-201ENST00000384589 121 ntBASIC1.87□□□□□ -2.11
ITGB1P05556 RPL39P25-201ENST00000449384 154 ntBASIC1.87□□□□□ -2.11
ITGB1P05556 RNU7-67P-201ENST00000459003 62 ntBASIC1.87□□□□□ -2.11
ITGB1P05556 AL162726.3-218ENST00000636401 95 ntBASIC1.87□□□□□ -2.11
ITGB1P05556 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ITGB1P05556 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ITGB1P05556 RNU6-1113P-201ENST00000384348 107 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 MIR499A-201ENST00000384903 122 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ITGB1P05556 RNU6-816P-201ENST00000390914 107 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 RNU6-1268P-201ENST00000391214 107 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 RNU6-1239P-201ENST00000391310 107 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 SNORD123-201ENST00000459473 70 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.86□□□□□ -2.11
ITGB1P05556 RPS23P4-201ENST00000487908 423 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 SNORA40.13-201ENST00000516379 120 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 Y_RNA.773-201ENST00000607168 90 ntBASIC1.86□□□□□ -2.11
ITGB1P05556 RNU6-1131P-201ENST00000364955 107 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 RNU6-439P-201ENST00000384188 106 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 RNU6-913P-201ENST00000390913 95 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 SUMO2P12-201ENST00000405924 140 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 JTBP1-201ENST00000441314 247 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 RPS29P29-201ENST00000456396 171 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 RNU7-95P-201ENST00000459222 64 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 AC113410.1-201ENST00000505029 247 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 RNU2-13P-201ENST00000515909 113 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 MIR4419B-201ENST00000577260 68 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 MIR4713-201ENST00000582691 75 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 MIR4791-201ENST00000607666 84 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 MIR1255B1-201ENST00000636325 63 ntBASIC1.85□□□□□ -2.11
ITGB1P05556 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
ITGB1P05556 MIR488-201ENST00000365739 83 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 266.3 ms