Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.1□□□□□ -2.39
HLA-DQB1P01920 Y_RNA.777-201ENST00000516982 102 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 AP003327.1-201ENST00000529684 127 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 MIR5197-201ENST00000583721 112 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 MIR3171-201ENST00000584270 74 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 SNORA4-201ENST00000584302 138 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 Y_RNA.771-201ENST00000598668 102 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 Y_RNA.789-201ENST00000622480 102 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 MIR6841-201ENST00000637129 72 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 AL589743.1-201ENST00000551932 2712 ntBASIC0.1□□□□□ -2.39
HLA-DQB1P01920 Y_RNA.44-201ENST00000362676 108 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.542-201ENST00000384641 111 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 MIR644A-201ENST00000385262 94 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 U8.15-201ENST00000390947 134 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 SNORD93-201ENST00000408813 74 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 RNU4-83P-201ENST00000410863 133 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 AL117351.2-201ENST00000513571 157 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.09□□□□□ -2.4
HLA-DQB1P01920 MIR4282-201ENST00000583613 67 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 AC091932.4-201ENST00000623386 200 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.09□□□□□ -2.4
HLA-DQB1P01920 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.13-201ENST00000362403 112 ntBASIC0.08□□□□□ -2.4
HLA-DQB1P01920 RNU6-985P-201ENST00000410182 104 ntBASIC0.08□□□□□ -2.4
HLA-DQB1P01920 RNA5SP261-201ENST00000410536 106 ntBASIC0.08□□□□□ -2.4
HLA-DQB1P01920 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.08□□□□□ -2.4
HLA-DQB1P01920 RNU6-561P-201ENST00000516222 102 ntBASIC0.08□□□□□ -2.4
HLA-DQB1P01920 AL365205.2-201ENST00000594586 68 ntBASIC0.08□□□□□ -2.4
HLA-DQB1P01920 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
HLA-DQB1P01920 MIR302B-201ENST00000362188 73 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.61-201ENST00000362835 102 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 RNU6-1292P-201ENST00000383856 107 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 RNU6-381P-201ENST00000391259 108 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 RNU7-80P-201ENST00000459562 61 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.07□□□□□ -2.4
HLA-DQB1P01920 AC141846.1-201ENST00000568348 142 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 MIR4491-201ENST00000581087 68 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 MIR3129-201ENST00000581095 76 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 MIR6082-201ENST00000613604 109 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 MIR6755-201ENST00000619993 66 ntBASIC0.07□□□□□ -2.4
HLA-DQB1P01920 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.32-201ENST00000362589 110 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.237-201ENST00000364439 102 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 MIR499A-201ENST00000384903 122 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.618-201ENST00000410949 107 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 AL512326.2-201ENST00000426359 151 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 AC073261.1-201ENST00000429409 121 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 MTCYBP6-201ENST00000441810 138 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 RNU6-1132P-201ENST00000459214 107 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 SNORA31.14-201ENST00000516728 116 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 RNA5SP268-201ENST00000516828 124 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 RNU6-765P-201ENST00000516916 99 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 RNU6-570P-201ENST00000517051 105 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 AL442067.1-201ENST00000613261 223 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 U2.14-201ENST00000615943 113 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 AL365265.1-201ENST00000621045 234 ntBASIC0.06□□□□□ -2.4
HLA-DQB1P01920 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.164-201ENST00000363709 102 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.199-201ENST00000364014 102 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 RNU6-949P-201ENST00000384040 107 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.454-201ENST00000384224 113 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 RNU6-1109P-201ENST00000391187 107 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 RNU4-43P-201ENST00000410628 137 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 AC113618.1-201ENST00000416747 285 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 MTND4LP11-201ENST00000422184 280 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 MIR3152-201ENST00000579801 74 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 MIR7107-201ENST00000611489 80 ntBASIC0.05□□□□□ -2.4
HLA-DQB1P01920 MIR335-201ENST00000362173 94 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.122-201ENST00000363331 96 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.176-201ENST00000363815 109 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
HLA-DQB1P01920 RNA5SP237-201ENST00000410414 113 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 AC069271.1-201ENST00000445577 156 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 TRBVB-201ENST00000477100 408 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 SCARNA15-202ENST00000516881 127 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 RNA5SP47-201ENST00000517230 109 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 AL442663.2-201ENST00000554385 511 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 MIR924-201ENST00000638017 53 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 AL596211.1-201ENST00000569873 2277 ntBASIC0.04□□□□□ -2.4
HLA-DQB1P01920 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
HLA-DQB1P01920 RNU6-403P-201ENST00000363163 104 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.174-201ENST00000363781 105 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 RNU6-978P-201ENST00000364371 103 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 SNORA33.2-201ENST00000365413 134 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 Y_RNA.518-201ENST00000384552 113 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 RNU6-291P-201ENST00000384720 107 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 AC011921.3-201ENST00000605540 361 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 AC021613.1-201ENST00000623880 111 ntBASIC0.03□□□□□ -2.4
HLA-DQB1P01920 SNORA22.1-201ENST00000362701 134 ntBASIC0.02□□□□□ -2.41
HLA-DQB1P01920 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
HLA-DQB1P01920 RNU6-867P-201ENST00000364956 107 ntBASIC0.02□□□□□ -2.41
HLA-DQB1P01920 RNY1P13-201ENST00000365030 105 ntBASIC0.02□□□□□ -2.41
HLA-DQB1P01920 RNU6-728P-201ENST00000365375 104 ntBASIC0.02□□□□□ -2.41
HLA-DQB1P01920 Y_RNA.416-201ENST00000384014 113 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms