Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MTATP8P1-201ENST00000467115 207 ntBASIC0.52□□□□□ -2.33
GGPS1O95749 AP003072.1-201ENST00000531740 145 ntBASIC0.52□□□□□ -2.33
GGPS1O95749 AC010487.4-201ENST00000637027 61 ntBASIC0.52□□□□□ -2.33
GGPS1O95749 Y_RNA.23-201ENST00000362496 106 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 RNU4-17P-201ENST00000365598 141 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 Y_RNA.542-201ENST00000384641 111 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 MIR125B2-201ENST00000385128 89 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 MT-TF-201ENST00000387314 71 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 MIR1257-201ENST00000408490 117 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 AL442663.2-201ENST00000554385 511 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 AC006504.6-201ENST00000590142 199 ntBASIC0.51□□□□□ -2.33
GGPS1O95749 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
GGPS1O95749 MIR342-201ENST00000362212 99 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 RNU6-653P-201ENST00000363074 106 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 RNU6-238P-201ENST00000363313 106 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 SNORD12C-201ENST00000386307 89 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 SNORA26.6-201ENST00000391256 115 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 RNU7-185P-201ENST00000459215 60 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 MIR376A2-201ENST00000636782 80 ntBASIC0.5□□□□□ -2.33
GGPS1O95749 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
GGPS1O95749 MIR302B-201ENST00000362188 73 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 RNU6-472P-201ENST00000384299 107 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 RNU6-1160P-201ENST00000384546 104 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 Y_RNA.574-201ENST00000384766 95 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 MIR548F4-201ENST00000408515 105 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 RNA5SP261-201ENST00000410536 106 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.49□□□□□ -2.33
GGPS1O95749 AC090897.1-201ENST00000580909 226 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 MIR5197-201ENST00000583721 112 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 MIR6717-201ENST00000622747 73 ntBASIC0.49□□□□□ -2.33
GGPS1O95749 MIR30D-201ENST00000362283 70 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 RNU6-728P-201ENST00000365375 104 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 Y_RNA.351-201ENST00000365436 96 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
GGPS1O95749 Y_RNA.416-201ENST00000384014 113 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 RNU6-364P-201ENST00000384387 107 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
GGPS1O95749 SNORA79-201ENST00000408376 140 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 SNORD100-201ENST00000408573 76 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 RNU7-80P-201ENST00000459562 61 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 MIR1273G-201ENST00000577677 100 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 SNORD92-201ENST00000585078 85 ntBASIC0.48□□□□□ -2.33
GGPS1O95749 RNA5SP325-201ENST00000363756 130 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 Y_RNA.262-201ENST00000364641 102 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 Y_RNA.326-201ENST00000365176 113 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 Y_RNA.352-201ENST00000365439 102 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-1319P-201ENST00000390855 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-747P-201ENST00000390928 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-241P-201ENST00000391148 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-447P-201ENST00000410293 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-1118P-201ENST00000410382 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-1076P-201ENST00000410397 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-355P-201ENST00000410427 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-791P-201ENST00000410467 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-705P-201ENST00000410601 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU4-43P-201ENST00000410628 137 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-1100P-201ENST00000410691 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-860P-201ENST00000410860 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-1217P-201ENST00000411276 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-785P-201ENST00000411324 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU7-102P-201ENST00000458948 62 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 MIR3129-201ENST00000581095 76 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 AC008608.1-201ENST00000603910 127 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 AL162730.1-201ENST00000605734 292 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 U6.90-201ENST00000614007 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 U6.70-201ENST00000620287 104 ntBASIC0.47□□□□□ -2.33
GGPS1O95749 RNU6-103P-201ENST00000363686 107 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 Y_RNA.176-201ENST00000363815 109 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 RNU6-1292P-201ENST00000383856 107 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 Y_RNA.454-201ENST00000384224 113 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
GGPS1O95749 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.46□□□□□ -2.34
GGPS1O95749 RNU6-561P-201ENST00000516222 102 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 RNU7-156P-201ENST00000517214 74 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 AL365205.2-201ENST00000594586 68 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 AL442067.1-201ENST00000613261 223 ntBASIC0.46□□□□□ -2.34
GGPS1O95749 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
GGPS1O95749 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
GGPS1O95749 Y_RNA.618-201ENST00000410949 107 ntBASIC0.45□□□□□ -2.34
GGPS1O95749 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.45□□□□□ -2.34
GGPS1O95749 RNU7-45P-201ENST00000459460 63 ntBASIC0.45□□□□□ -2.34
GGPS1O95749 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
GGPS1O95749 AC091932.4-201ENST00000623386 200 ntBASIC0.45□□□□□ -2.34
GGPS1O95749 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
GGPS1O95749 MIR4643-201ENST00000577473 78 ntBASIC0.44□□□□□ -2.34
GGPS1O95749 AC011921.3-201ENST00000605540 361 ntBASIC0.44□□□□□ -2.34
GGPS1O95749 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
GGPS1O95749 AL117187.1-201ENST00000555482 181 ntBASIC0.43□□□□□ -2.34
GGPS1O95749 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
GGPS1O95749 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
GGPS1O95749 Y_RNA.145-201ENST00000363527 102 ntBASIC0.42□□□□□ -2.34
GGPS1O95749 Y_RNA.396-201ENST00000383949 103 ntBASIC0.42□□□□□ -2.34
GGPS1O95749 MIR606-201ENST00000384851 96 ntBASIC0.42□□□□□ -2.34
GGPS1O95749 AL662814.1-201ENST00000617364 121 ntBASIC0.42□□□□□ -2.34
GGPS1O95749 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 Y_RNA.76-201ENST00000362931 109 ntBASIC0.41□□□□□ -2.34
GGPS1O95749 SNORA63-201ENST00000363450 132 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms