Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 RNA5SP261-201ENST00000410536 106 ntBASIC0.02□□□□□ -2.41
RAB3DO95716 SEPT7P4-201ENST00000437076 306 ntBASIC0.02□□□□□ -2.41
RAB3DO95716 MTATP6P23-201ENST00000440153 476 ntBASIC0.02□□□□□ -2.41
RAB3DO95716 RNU6-1053P-201ENST00000515930 101 ntBASIC0.02□□□□□ -2.41
RAB3DO95716 RNU6-1143P-201ENST00000516125 104 ntBASIC0.02□□□□□ -2.41
RAB3DO95716 AC134503.1-201ENST00000633048 54 ntBASIC0.02□□□□□ -2.41
RAB3DO95716 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.44-201ENST00000362676 108 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.338-201ENST00000365320 114 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.430-201ENST00000384081 110 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 RNU6-187P-201ENST00000384139 106 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 SNORA72.6-201ENST00000384520 129 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.01□□□□□ -2.41
RAB3DO95716 RNU7-80P-201ENST00000459562 61 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 MTND5P34-201ENST00000568888 325 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 MIR151B-201ENST00000584249 96 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 AL589743.1-201ENST00000551932 2712 ntBASIC0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.191-201ENST00000363972 113 ntBASIC0□□□□□ -2.41
RAB3DO95716 Y_RNA.423-201ENST00000384057 113 ntBASIC0□□□□□ -2.41
RAB3DO95716 RNU6-291P-201ENST00000384720 107 ntBASIC0□□□□□ -2.41
RAB3DO95716 PCNPP3-201ENST00000393579 471 ntBASIC0□□□□□ -2.41
RAB3DO95716 MIR548P-201ENST00000408336 84 ntBASIC0□□□□□ -2.41
RAB3DO95716 Y_RNA.618-201ENST00000410949 107 ntBASIC0□□□□□ -2.41
RAB3DO95716 MIR3152-201ENST00000579801 74 ntBASIC0□□□□□ -2.41
RAB3DO95716 MIR3171-201ENST00000584270 74 ntBASIC0□□□□□ -2.41
RAB3DO95716 AL442067.1-201ENST00000613261 223 ntBASIC0□□□□□ -2.41
RAB3DO95716 MIR6715A-201ENST00000615929 79 ntBASIC0□□□□□ -2.41
RAB3DO95716 SNORA22.1-201ENST00000362701 134 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 MIR1276-201ENST00000408707 83 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 AC113618.1-201ENST00000416747 285 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 SNORD2.1-201ENST00000458762 69 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 SNORA25.16-201ENST00000516741 121 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 AL442663.2-201ENST00000554385 511 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 MIR4769-201ENST00000584126 77 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 AC104984.5-201ENST00000586878 94 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 AC104408.1-201ENST00000605241 170 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 MIR6828-201ENST00000636181 60 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 MIR6841-201ENST00000637129 72 ntBASIC-0.01□□□□□ -2.41
RAB3DO95716 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 SNORA18-201ENST00000384416 132 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
RAB3DO95716 MIR936-201ENST00000401264 98 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 RNA5SP193-201ENST00000410353 107 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 RNA5SP47-201ENST00000517230 109 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 AC020661.2-201ENST00000560114 134 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 AL365265.1-201ENST00000621045 234 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 AC021613.1-201ENST00000623880 111 ntBASIC-0.02□□□□□ -2.41
RAB3DO95716 SNORA9.1-201ENST00000362412 131 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 RNU6-949P-201ENST00000384040 107 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 SNORA20-201ENST00000384662 132 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 SNORD28-201ENST00000384706 75 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 RNU6-535P-201ENST00000384722 107 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 RNU6-381P-201ENST00000391259 108 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 RNA5SP247-201ENST00000411181 105 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 RNU6-765P-201ENST00000516916 99 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.03□□□□□ -2.41
RAB3DO95716 MIR924-201ENST00000638017 53 ntBASIC-0.03□□□□□ -2.41
RAB3DO95716 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNU4-16P-201ENST00000364737 141 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNU1-133P-201ENST00000364867 167 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNY1P13-201ENST00000365030 105 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 TRBVB-201ENST00000477100 408 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNU7-129P-201ENST00000516128 62 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 MIR4752-201ENST00000579672 72 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 MTND5P32-201ENST00000560711 1802 ntBASIC-0.04□□□□□ -2.42
RAB3DO95716 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.05□□□□□ -2.42
RAB3DO95716 MIR411-201ENST00000362239 96 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 RNA5SP245-201ENST00000364239 121 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.05□□□□□ -2.42
RAB3DO95716 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms