Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MIR8074-201ENST00000615081 81 ntBASIC2.01□□□□□ -2.09
CNOT4O95628 MIR6132-201ENST00000622083 109 ntBASIC2.01□□□□□ -2.09
CNOT4O95628 SNORD3E-202ENST00000627253 216 ntBASIC2.01□□□□□ -2.09
CNOT4O95628 MIR1255B1-201ENST00000636325 63 ntBASIC2.01□□□□□ -2.09
CNOT4O95628 MIR6841-201ENST00000637129 72 ntBASIC2.01□□□□□ -2.09
CNOT4O95628 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
CNOT4O95628 RNY3P2-201ENST00000362918 102 ntBASIC2□□□□□ -2.09
CNOT4O95628 Y_RNA.155-201ENST00000363632 101 ntBASIC2□□□□□ -2.09
CNOT4O95628 5S_rRNA.2-201ENST00000391293 112 ntBASIC2□□□□□ -2.09
CNOT4O95628 AL603825.1-201ENST00000438481 80 ntBASIC2□□□□□ -2.09
CNOT4O95628 RNU7-73P-201ENST00000458743 63 ntBASIC2□□□□□ -2.09
CNOT4O95628 DNAJC19P9-201ENST00000555084 351 ntBASIC2□□□□□ -2.09
CNOT4O95628 FAM71BP1-201ENST00000604431 523 ntBASIC2□□□□□ -2.09
CNOT4O95628 Y_RNA.773-201ENST00000607168 90 ntBASIC2□□□□□ -2.09
CNOT4O95628 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
CNOT4O95628 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
CNOT4O95628 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2□□□□□ -2.09
CNOT4O95628 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CNOT4O95628 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 SNORD115-2-201ENST00000362842 82 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 RNU6-363P-201ENST00000362895 105 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 RNU6-1099P-201ENST00000363533 107 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 RNU4-67P-201ENST00000364569 141 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 SNORD115-20-201ENST00000365099 82 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 RNU6-360P-201ENST00000390944 104 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 SNORA26.6-201ENST00000391256 115 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 AC008834.1-201ENST00000511612 175 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 SCARNA23-201ENST00000516060 130 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.99□□□□□ -2.09
CNOT4O95628 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 MIR4694-201ENST00000578534 80 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 AC103810.8-201ENST00000607347 118 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 MIR4791-201ENST00000607666 84 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.99□□□□□ -2.09
CNOT4O95628 MALAT1.1-201ENST00000618249 95 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 AC243994.1-201ENST00000618627 109 ntBASIC1.99□□□□□ -2.09
CNOT4O95628 Y_RNA.10-201ENST00000362371 110 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 Y_RNA.360-201ENST00000365512 102 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 Y_RNA.430-201ENST00000384081 110 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 RNU6-409P-201ENST00000384114 104 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 RNU6-439P-201ENST00000384188 106 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 Y_RNA.470-201ENST00000384307 117 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 SNORD77B-201ENST00000391112 67 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 Y_RNA.601-201ENST00000410500 113 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 RNU6-733P-201ENST00000410759 104 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 RNU6-1190P-201ENST00000410811 104 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 RNA5SP33-201ENST00000516687 98 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 MIR548AE2-201ENST00000583456 67 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 AL020996.3-201ENST00000606617 222 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 MIR6717-201ENST00000622747 73 ntBASIC1.98□□□□□ -2.09
CNOT4O95628 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
CNOT4O95628 AP000648.3-201ENST00000623539 4507 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 Y_RNA.466-201ENST00000384294 113 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RNY1P7-201ENST00000384743 110 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RNU6-1067P-201ENST00000384752 107 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RNU6-913P-201ENST00000390913 95 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RPS3AP1-201ENST00000413190 320 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RNA5SP458-201ENST00000516188 119 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RNU6-762P-201ENST00000517107 102 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 RNU6-844P-201ENST00000517175 102 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 FAM106DP-201ENST00000586416 501 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 AL442128.1-201ENST00000615151 90 ntBASIC1.97□□□□□ -2.09
CNOT4O95628 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CNOT4O95628 Y_RNA.537-201ENST00000384626 109 ntBASIC1.96□□□□□ -2.1
CNOT4O95628 MIR577-201ENST00000385196 96 ntBASIC1.96□□□□□ -2.1
CNOT4O95628 SNORA26.2-201ENST00000390922 122 ntBASIC1.96□□□□□ -2.1
CNOT4O95628 RNY4P29-201ENST00000410801 97 ntBASIC1.96□□□□□ -2.1
CNOT4O95628 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
CNOT4O95628 snoU13.9-201ENST00000458927 103 ntBASIC1.96□□□□□ -2.1
CNOT4O95628 RNU6-832P-201ENST00000363319 107 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 RNU6-457P-201ENST00000363999 107 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 Y_RNA.342-201ENST00000365352 113 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 RNU6-616P-201ENST00000384353 107 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 MIR221-201ENST00000385135 110 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 SNORA74.3-201ENST00000517108 154 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
CNOT4O95628 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CNOT4O95628 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CNOT4O95628 MIR605-201ENST00000385078 83 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 MIR934-201ENST00000401241 83 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 SNORA7.5-201ENST00000410672 110 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 MIR1270-201ENST00000459320 83 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 snoU13.16-201ENST00000459350 104 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 AC024614.2-201ENST00000577584 372 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.94□□□□□ -2.1
CNOT4O95628 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
CNOT4O95628 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
CNOT4O95628 RNU6-679P-201ENST00000391003 106 ntBASIC1.93□□□□□ -2.1
CNOT4O95628 AL353813.1-201ENST00000440700 253 ntBASIC1.93□□□□□ -2.1
CNOT4O95628 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.93□□□□□ -2.1
CNOT4O95628 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CNOT4O95628 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CNOT4O95628 RNU6-1123P-201ENST00000362347 106 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 SNORA1.1-201ENST00000364671 133 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 Y_RNA.388-201ENST00000383919 113 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 SNORA32-201ENST00000384072 121 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
CNOT4O95628 RNA5SP247-201ENST00000411181 105 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms