Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC244023.1-201ENST00000426884 112 ntBASIC0.53□□□□□ -2.32
SIX3O95343 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
SIX3O95343 RNU7-96P-201ENST00000459535 64 ntBASIC0.53□□□□□ -2.32
SIX3O95343 Y_RNA.701-201ENST00000516812 110 ntBASIC0.53□□□□□ -2.32
SIX3O95343 AP003327.1-201ENST00000529684 127 ntBASIC0.53□□□□□ -2.32
SIX3O95343 AC242498.1-201ENST00000604134 111 ntBASIC0.53□□□□□ -2.32
SIX3O95343 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SIX3O95343 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
SIX3O95343 MIR548I3-201ENST00000408378 149 ntBASIC0.52□□□□□ -2.33
SIX3O95343 MIR1257-201ENST00000408490 117 ntBASIC0.52□□□□□ -2.33
SIX3O95343 RNU2-55P-201ENST00000411146 174 ntBASIC0.52□□□□□ -2.33
SIX3O95343 MIR18B-201ENST00000454574 71 ntBASIC0.52□□□□□ -2.33
SIX3O95343 RNU6-1137P-201ENST00000517073 99 ntBASIC0.52□□□□□ -2.33
SIX3O95343 IGLVI-20-201ENST00000519296 130 ntBASIC0.52□□□□□ -2.33
SIX3O95343 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.52□□□□□ -2.33
SIX3O95343 MIR4804-201ENST00000581683 73 ntBASIC0.52□□□□□ -2.33
SIX3O95343 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
SIX3O95343 RNU6-238P-201ENST00000363313 106 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-740P-201ENST00000364734 105 ntBASIC0.51□□□□□ -2.33
SIX3O95343 Y_RNA.634-201ENST00000364811 113 ntBASIC0.51□□□□□ -2.33
SIX3O95343 Y_RNA.410-201ENST00000383992 113 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-1319P-201ENST00000390855 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-747P-201ENST00000390928 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-241P-201ENST00000391148 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-447P-201ENST00000410293 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-1118P-201ENST00000410382 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-1076P-201ENST00000410397 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-355P-201ENST00000410427 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-791P-201ENST00000410467 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-705P-201ENST00000410601 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-1100P-201ENST00000410691 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-860P-201ENST00000410860 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-177P-201ENST00000411257 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-1217P-201ENST00000411276 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-938P-201ENST00000411285 103 ntBASIC0.51□□□□□ -2.33
SIX3O95343 RNU6-785P-201ENST00000411324 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 AF228730.3-201ENST00000436691 102 ntBASIC0.51□□□□□ -2.33
SIX3O95343 snoU13.11-201ENST00000459219 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 MIR3612-201ENST00000579753 87 ntBASIC0.51□□□□□ -2.33
SIX3O95343 U6.90-201ENST00000614007 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 U6.70-201ENST00000620287 104 ntBASIC0.51□□□□□ -2.33
SIX3O95343 Z97988.1-201ENST00000637697 135 ntBASIC0.51□□□□□ -2.33
SIX3O95343 Y_RNA.91-201ENST00000363042 107 ntBASIC0.5□□□□□ -2.33
SIX3O95343 Y_RNA.237-201ENST00000364439 102 ntBASIC0.5□□□□□ -2.33
SIX3O95343 RNU4-45P-201ENST00000365469 141 ntBASIC0.5□□□□□ -2.33
SIX3O95343 RNY1P8-201ENST00000383970 114 ntBASIC0.5□□□□□ -2.33
SIX3O95343 RNY3P5-201ENST00000384127 102 ntBASIC0.5□□□□□ -2.33
SIX3O95343 MIR548A2-201ENST00000384956 97 ntBASIC0.5□□□□□ -2.33
SIX3O95343 MT-TT-201ENST00000387460 66 ntBASIC0.5□□□□□ -2.33
SIX3O95343 RNA5SP299-201ENST00000391203 116 ntBASIC0.5□□□□□ -2.33
SIX3O95343 AL606845.1-201ENST00000404881 255 ntBASIC0.5□□□□□ -2.33
SIX3O95343 MIR1302-6-201ENST00000408466 90 ntBASIC0.5□□□□□ -2.33
SIX3O95343 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
SIX3O95343 SNX3P1X-201ENST00000414887 175 ntBASIC0.5□□□□□ -2.33
SIX3O95343 AC104692.1-201ENST00000472406 90 ntBASIC0.5□□□□□ -2.33
SIX3O95343 RNU6-635P-201ENST00000516651 102 ntBASIC0.5□□□□□ -2.33
SIX3O95343 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.5□□□□□ -2.33
SIX3O95343 AC020891.4-201ENST00000605745 93 ntBASIC0.5□□□□□ -2.33
SIX3O95343 MIR8055-201ENST00000610739 97 ntBASIC0.5□□□□□ -2.33
SIX3O95343 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SIX3O95343 Y_RNA.185-201ENST00000363894 100 ntBASIC0.49□□□□□ -2.33
SIX3O95343 RNU6-923P-201ENST00000364753 107 ntBASIC0.49□□□□□ -2.33
SIX3O95343 RNU6-679P-201ENST00000391003 106 ntBASIC0.49□□□□□ -2.33
SIX3O95343 RNA5SP261-201ENST00000410536 106 ntBASIC0.49□□□□□ -2.33
SIX3O95343 RNA5SP153-201ENST00000516498 76 ntBASIC0.49□□□□□ -2.33
SIX3O95343 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
SIX3O95343 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.49□□□□□ -2.33
SIX3O95343 MIR6740-201ENST00000618268 113 ntBASIC0.49□□□□□ -2.33
SIX3O95343 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SIX3O95343 RNU6-369P-201ENST00000362515 102 ntBASIC0.48□□□□□ -2.33
SIX3O95343 Y_RNA.35-201ENST00000362601 101 ntBASIC0.48□□□□□ -2.33
SIX3O95343 RNU4-67P-201ENST00000364569 141 ntBASIC0.48□□□□□ -2.33
SIX3O95343 Y_RNA.304-201ENST00000365011 112 ntBASIC0.48□□□□□ -2.33
SIX3O95343 Y_RNA.351-201ENST00000365436 96 ntBASIC0.48□□□□□ -2.33
SIX3O95343 RNU6-602P-201ENST00000411155 105 ntBASIC0.48□□□□□ -2.33
SIX3O95343 RNU6-998P-201ENST00000515894 101 ntBASIC0.48□□□□□ -2.33
SIX3O95343 RNU7-70P-201ENST00000516941 66 ntBASIC0.48□□□□□ -2.33
SIX3O95343 U2.14-201ENST00000615943 113 ntBASIC0.48□□□□□ -2.33
SIX3O95343 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SIX3O95343 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
SIX3O95343 Y_RNA.422-201ENST00000384054 114 ntBASIC0.47□□□□□ -2.33
SIX3O95343 RNU6-1228P-201ENST00000391014 107 ntBASIC0.47□□□□□ -2.33
SIX3O95343 RNU6-1109P-201ENST00000391187 107 ntBASIC0.47□□□□□ -2.33
SIX3O95343 RNA5SP237-201ENST00000410414 113 ntBASIC0.47□□□□□ -2.33
SIX3O95343 snoU13.2-201ENST00000459201 104 ntBASIC0.47□□□□□ -2.33
SIX3O95343 Y_RNA.66-201ENST00000362862 102 ntBASIC0.46□□□□□ -2.34
SIX3O95343 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SIX3O95343 MIR125B2-201ENST00000385128 89 ntBASIC0.46□□□□□ -2.34
SIX3O95343 MIR616-201ENST00000385293 97 ntBASIC0.46□□□□□ -2.34
SIX3O95343 SNORD57-201ENST00000448188 72 ntBASIC0.46□□□□□ -2.34
SIX3O95343 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
SIX3O95343 RNU7-185P-201ENST00000459215 60 ntBASIC0.46□□□□□ -2.34
SIX3O95343 RNU7-156P-201ENST00000517214 74 ntBASIC0.46□□□□□ -2.34
SIX3O95343 Y_RNA.757-201ENST00000578934 114 ntBASIC0.46□□□□□ -2.34
SIX3O95343 AC092634.7-201ENST00000621022 103 ntBASIC0.46□□□□□ -2.34
SIX3O95343 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SIX3O95343 Y_RNA.11-201ENST00000362375 109 ntBASIC0.45□□□□□ -2.34
SIX3O95343 Y_RNA.54-201ENST00000362766 105 ntBASIC0.45□□□□□ -2.34
SIX3O95343 RNU6-728P-201ENST00000365375 104 ntBASIC0.45□□□□□ -2.34
SIX3O95343 RNU6-484P-201ENST00000384016 107 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms