Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SPDEFO95238 RPL39P25-201ENST00000449384 154 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 RNU7-41P-201ENST00000515917 61 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
SPDEFO95238 MIR548AE2-201ENST00000583456 67 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 AL513534.2-201ENST00000603836 250 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 Y_RNA.773-201ENST00000607168 90 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 MIR6852-201ENST00000621699 66 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 MIR4251-201ENST00000635819 61 ntBASIC1.66□□□□□ -2.14
SPDEFO95238 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
SPDEFO95238 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SPDEFO95238 Y_RNA.500-201ENST00000384466 111 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 MIR1270-201ENST00000459320 83 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 UBE2DNL-203ENST00000474922 222 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 Y_RNA.677-201ENST00000516401 85 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 Y_RNA.694-201ENST00000516677 117 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 MIR8074-201ENST00000615081 81 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 AC064859.1-201ENST00000624741 174 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 MIR1255B1-201ENST00000636325 63 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 MIR219B-201ENST00000637023 88 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.15
SPDEFO95238 MIR449A-201ENST00000362113 91 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 Y_RNA.78-201ENST00000362970 110 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 SNORD77B-201ENST00000391112 67 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 RNA5SP508-201ENST00000411327 119 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 SNORD111.1-201ENST00000516421 86 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 RNU6-922P-201ENST00000516753 99 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 MIR548AO-201ENST00000579992 96 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SPDEFO95238 MIR8065-201ENST00000620577 100 ntBASIC1.64□□□□□ -2.15
SPDEFO95238 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.63□□□□□ -2.15
SPDEFO95238 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SPDEFO95238 Y_RNA.348-201ENST00000365403 103 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 Y_RNA.354-201ENST00000365448 111 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 Y_RNA.507-201ENST00000384500 99 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 RN7SKP223-201ENST00000410582 62 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 SNORA19.1-201ENST00000410656 129 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 RNU6-602P-201ENST00000411155 105 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 RNU6-250P-201ENST00000516958 103 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 AC024614.2-201ENST00000577584 372 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 AP001318.4-201ENST00000616637 121 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.63□□□□□ -2.15
SPDEFO95238 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SPDEFO95238 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
SPDEFO95238 RNU6-363P-201ENST00000362895 105 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 RNA5SP48-201ENST00000363969 126 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 RNU4-67P-201ENST00000364569 141 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 Y_RNA.544-201ENST00000384650 113 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 MIR590-201ENST00000385008 97 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 MIR30A-201ENST00000385092 71 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 RNU6-904P-201ENST00000516206 101 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 CYP3A52P-201ENST00000563326 91 ntBASIC1.62□□□□□ -2.15
SPDEFO95238 RNU6-1255P-201ENST00000363434 112 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 RNU6-640P-201ENST00000363693 105 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 SNORA32-201ENST00000384072 121 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 RNU6-616P-201ENST00000384353 107 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 RNU6-905P-201ENST00000384434 107 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 SNORA3.2-201ENST00000408221 125 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 Z98742.3-201ENST00000418637 326 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 AC090844.1-201ENST00000422019 156 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 AC009474.2-201ENST00000451383 136 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 AC141557.1-201ENST00000540982 400 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 MIR3192-201ENST00000584920 77 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 AL357312.1-201ENST00000603879 298 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 Y_RNA.818-201ENST00000618813 71 ntBASIC1.61□□□□□ -2.15
SPDEFO95238 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
SPDEFO95238 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SPDEFO95238 Y_RNA.155-201ENST00000363632 101 ntBASIC1.6□□□□□ -2.15
SPDEFO95238 RNU6-409P-201ENST00000384114 104 ntBASIC1.6□□□□□ -2.15
SPDEFO95238 RNU6-342P-201ENST00000384521 104 ntBASIC1.6□□□□□ -2.15
SPDEFO95238 AC245047.7-201ENST00000440265 293 ntBASIC1.6□□□□□ -2.15
SPDEFO95238 AL096861.1-201ENST00000610899 123 ntBASIC1.6□□□□□ -2.15
SPDEFO95238 GHRLOS.1-201ENST00000610995 70 ntBASIC1.6□□□□□ -2.15
SPDEFO95238 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SPDEFO95238 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.59□□□□□ -2.15
SPDEFO95238 SNORA67.3-201ENST00000384366 140 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 SNORA18-201ENST00000384416 132 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 SNORA64-201ENST00000384674 134 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 AC019129.1-201ENST00000403786 261 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 RNU6-733P-201ENST00000410759 104 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 AL353813.1-201ENST00000440700 253 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 RNU6-970P-201ENST00000516312 107 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 RNU6-109P-201ENST00000516364 107 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 RNU6-184P-201ENST00000516514 107 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 RNU7-35P-201ENST00000517174 62 ntBASIC1.59□□□□□ -2.15
SPDEFO95238 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
SPDEFO95238 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SPDEFO95238 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SPDEFO95238 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 RNU6-1099P-201ENST00000363533 107 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 RNU4-36P-201ENST00000364294 144 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 Y_RNA.360-201ENST00000365512 102 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 SNORD38B-201ENST00000384690 67 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 HSPE1P24-201ENST00000450782 238 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
SPDEFO95238 SNORA40.13-201ENST00000516379 120 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms