Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SOX30O94993 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
SOX30O94993 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
SOX30O94993 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SOX30O94993 RNU4-16P-201ENST00000364737 141 ntBASIC1.29□□□□□ -2.2
SOX30O94993 RNU6-690P-201ENST00000365242 106 ntBASIC1.29□□□□□ -2.2
SOX30O94993 RNY1P6-201ENST00000384193 109 ntBASIC1.29□□□□□ -2.2
SOX30O94993 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.29□□□□□ -2.2
SOX30O94993 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SOX30O94993 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
SOX30O94993 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.29□□□□□ -2.2
SOX30O94993 RNU1-123P-201ENST00000458950 160 ntBASIC1.29□□□□□ -2.2
SOX30O94993 snoU13.16-201ENST00000459350 104 ntBASIC1.29□□□□□ -2.2
SOX30O94993 RNU6-971P-201ENST00000516920 106 ntBASIC1.29□□□□□ -2.2
SOX30O94993 RNU6-789P-201ENST00000517105 102 ntBASIC1.29□□□□□ -2.2
SOX30O94993 MIR3910-1-201ENST00000580936 111 ntBASIC1.29□□□□□ -2.2
SOX30O94993 MIR3192-201ENST00000584920 77 ntBASIC1.29□□□□□ -2.2
SOX30O94993 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
SOX30O94993 Y_RNA.294-201ENST00000364916 102 ntBASIC1.28□□□□□ -2.2
SOX30O94993 MIR539-201ENST00000365690 78 ntBASIC1.28□□□□□ -2.2
SOX30O94993 SNORA24-201ENST00000384096 131 ntBASIC1.28□□□□□ -2.2
SOX30O94993 Y_RNA.466-201ENST00000384294 113 ntBASIC1.28□□□□□ -2.2
SOX30O94993 RNU7-45P-201ENST00000459460 63 ntBASIC1.28□□□□□ -2.2
SOX30O94993 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
SOX30O94993 AC132825.6-201ENST00000638861 357 ntBASIC1.28□□□□□ -2.2
SOX30O94993 SNORA25.3-201ENST00000363205 127 ntBASIC1.27□□□□□ -2.21
SOX30O94993 RNU6-913P-201ENST00000390913 95 ntBASIC1.27□□□□□ -2.21
SOX30O94993 RNA5SP261-201ENST00000410536 106 ntBASIC1.27□□□□□ -2.21
SOX30O94993 RNU7-73P-201ENST00000458743 63 ntBASIC1.27□□□□□ -2.21
SOX30O94993 RNU6-240P-201ENST00000516098 97 ntBASIC1.27□□□□□ -2.21
SOX30O94993 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
SOX30O94993 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
SOX30O94993 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SOX30O94993 Y_RNA.114-201ENST00000363265 113 ntBASIC1.26□□□□□ -2.21
SOX30O94993 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
SOX30O94993 Y_RNA.651-201ENST00000459380 103 ntBASIC1.26□□□□□ -2.21
SOX30O94993 RNU6-113P-201ENST00000516653 101 ntBASIC1.26□□□□□ -2.21
SOX30O94993 RNA5SP102-201ENST00000516865 106 ntBASIC1.26□□□□□ -2.21
SOX30O94993 RNU6-165P-201ENST00000517170 99 ntBASIC1.26□□□□□ -2.21
SOX30O94993 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
SOX30O94993 MIR3121-201ENST00000579680 77 ntBASIC1.26□□□□□ -2.21
SOX30O94993 MIR3152-201ENST00000579801 74 ntBASIC1.26□□□□□ -2.21
SOX30O94993 MIR548AO-201ENST00000579992 96 ntBASIC1.26□□□□□ -2.21
SOX30O94993 HSPE1P19-201ENST00000603327 295 ntBASIC1.26□□□□□ -2.21
SOX30O94993 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
SOX30O94993 RNU6-235P-201ENST00000362644 107 ntBASIC1.25□□□□□ -2.21
SOX30O94993 Y_RNA.191-201ENST00000363972 113 ntBASIC1.25□□□□□ -2.21
SOX30O94993 RNU6-647P-201ENST00000364243 107 ntBASIC1.25□□□□□ -2.21
SOX30O94993 SNORA1.1-201ENST00000364671 133 ntBASIC1.25□□□□□ -2.21
SOX30O94993 HMGN1P33-201ENST00000432945 451 ntBASIC1.25□□□□□ -2.21
SOX30O94993 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
SOX30O94993 AC133485.4-201ENST00000561835 220 ntBASIC1.25□□□□□ -2.21
SOX30O94993 AC138907.4-201ENST00000570107 226 ntBASIC1.25□□□□□ -2.21
SOX30O94993 AL020996.3-201ENST00000606617 222 ntBASIC1.25□□□□□ -2.21
SOX30O94993 AC021613.1-201ENST00000623880 111 ntBASIC1.25□□□□□ -2.21
SOX30O94993 RNU6-53P-201ENST00000365367 106 ntBASIC1.24□□□□□ -2.21
SOX30O94993 Y_RNA.540-201ENST00000384638 111 ntBASIC1.24□□□□□ -2.21
SOX30O94993 RNU6-1190P-201ENST00000410811 104 ntBASIC1.24□□□□□ -2.21
SOX30O94993 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.24□□□□□ -2.21
SOX30O94993 MIR4452-201ENST00000583004 71 ntBASIC1.24□□□□□ -2.21
SOX30O94993 AC021443.1-201ENST00000604478 211 ntBASIC1.24□□□□□ -2.21
SOX30O94993 AL157834.3-201ENST00000615543 103 ntBASIC1.24□□□□□ -2.21
SOX30O94993 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
SOX30O94993 MIR8065-201ENST00000620577 100 ntBASIC1.24□□□□□ -2.21
SOX30O94993 MIR103A2-201ENST00000362154 78 ntBASIC1.23□□□□□ -2.21
SOX30O94993 RNU6-349P-201ENST00000362402 107 ntBASIC1.23□□□□□ -2.21
SOX30O94993 Y_RNA.366-201ENST00000365540 102 ntBASIC1.23□□□□□ -2.21
SOX30O94993 AC245047.7-201ENST00000440265 293 ntBASIC1.23□□□□□ -2.21
SOX30O94993 AL158147.1-201ENST00000443970 75 ntBASIC1.23□□□□□ -2.21
SOX30O94993 RNU6-1061P-201ENST00000516530 99 ntBASIC1.23□□□□□ -2.21
SOX30O94993 AL137067.1-201ENST00000615933 120 ntBASIC1.23□□□□□ -2.21
SOX30O94993 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RNU6-1319P-201ENST00000390855 104 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RNU6-747P-201ENST00000390928 104 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RNU6-241P-201ENST00000391148 104 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RNU6-177P-201ENST00000411257 104 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RPS3AP1-201ENST00000413190 320 ntBASIC1.22□□□□□ -2.21
SOX30O94993 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
SOX30O94993 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
SOX30O94993 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RNU6-1234P-201ENST00000516877 103 ntBASIC1.22□□□□□ -2.21
SOX30O94993 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.22□□□□□ -2.21
SOX30O94993 AC108081.1-201ENST00000604358 221 ntBASIC1.22□□□□□ -2.21
SOX30O94993 MIR6717-201ENST00000622747 73 ntBASIC1.22□□□□□ -2.21
SOX30O94993 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
SOX30O94993 RNU6-396P-201ENST00000365369 105 ntBASIC1.21□□□□□ -2.22
SOX30O94993 RNU6-81P-201ENST00000365608 104 ntBASIC1.21□□□□□ -2.22
SOX30O94993 RNU6-959P-201ENST00000384671 107 ntBASIC1.21□□□□□ -2.22
SOX30O94993 SNORD38B-201ENST00000384690 67 ntBASIC1.21□□□□□ -2.22
SOX30O94993 AL022718.1-201ENST00000412004 84 ntBASIC1.21□□□□□ -2.22
SOX30O94993 RNU6-893P-201ENST00000458841 100 ntBASIC1.21□□□□□ -2.22
SOX30O94993 snoU13.25-201ENST00000458945 104 ntBASIC1.21□□□□□ -2.22
SOX30O94993 RNU7-164P-201ENST00000459221 62 ntBASIC1.21□□□□□ -2.22
SOX30O94993 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
SOX30O94993 MIR8055-201ENST00000610739 97 ntBASIC1.21□□□□□ -2.22
SOX30O94993 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
SOX30O94993 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
SOX30O94993 SNORA22.1-201ENST00000362701 134 ntBASIC1.2□□□□□ -2.22
SOX30O94993 Y_RNA.71-201ENST00000362892 104 ntBASIC1.2□□□□□ -2.22
SOX30O94993 Y_RNA.354-201ENST00000365448 111 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 220.7 ms