Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.19□□□□□ -2.06
PRPF40AO75400 RNU6-44P-201ENST00000384045 107 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 RNU6-1104P-201ENST00000384723 104 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 AC009474.2-201ENST00000451383 136 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 RPL30P7-201ENST00000479312 323 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 RNU6-412P-201ENST00000516434 106 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 RNU6-589P-201ENST00000516485 107 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 MIR3192-201ENST00000584920 77 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 MIR8055-201ENST00000610739 97 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 Z97988.1-201ENST00000637697 135 ntBASIC2.18□□□□□ -2.06
PRPF40AO75400 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.18□□□□□ -2.06
PRPF40AO75400 SNORA16.1-201ENST00000364597 132 ntBASIC2.17□□□□□ -2.06
PRPF40AO75400 Y_RNA.299-201ENST00000364973 94 ntBASIC2.17□□□□□ -2.06
PRPF40AO75400 AC113410.1-201ENST00000505029 247 ntBASIC2.17□□□□□ -2.06
PRPF40AO75400 RNY4P18-201ENST00000391107 89 ntBASIC2.16□□□□□ -2.06
PRPF40AO75400 RPS23P4-201ENST00000487908 423 ntBASIC2.16□□□□□ -2.06
PRPF40AO75400 AC008834.1-201ENST00000511612 175 ntBASIC2.16□□□□□ -2.06
PRPF40AO75400 RNA5SP33-201ENST00000516687 98 ntBASIC2.16□□□□□ -2.06
PRPF40AO75400 RNU7-6P-201ENST00000516845 62 ntBASIC2.16□□□□□ -2.06
PRPF40AO75400 AC027119.1-201ENST00000440877 241 ntBASIC2.15□□□□□ -2.07
PRPF40AO75400 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.15□□□□□ -2.07
PRPF40AO75400 MIR4419B-201ENST00000577260 68 ntBASIC2.15□□□□□ -2.07
PRPF40AO75400 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PRPF40AO75400 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PRPF40AO75400 SNORD48-201ENST00000364953 64 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 SNORA22-201ENST00000383907 134 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 SNORD38B-201ENST00000384690 67 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 SNORD12C-201ENST00000386307 89 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 MT-TI-201ENST00000387365 69 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 AC245047.7-201ENST00000440265 293 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 RNU6-1258P-201ENST00000516911 111 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 SNORD38B-202ENST00000625943 69 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 AL589743.1-201ENST00000551932 2712 ntBASIC2.14□□□□□ -2.07
PRPF40AO75400 MIR548D2-201ENST00000384955 97 ntBASIC2.13□□□□□ -2.07
PRPF40AO75400 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
PRPF40AO75400 RNU4-69P-201ENST00000410677 143 ntBASIC2.13□□□□□ -2.07
PRPF40AO75400 AC063976.4-201ENST00000421971 163 ntBASIC2.13□□□□□ -2.07
PRPF40AO75400 MIR4422-201ENST00000581938 83 ntBASIC2.13□□□□□ -2.07
PRPF40AO75400 SNORD115-2-201ENST00000362842 82 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 SNORA25.3-201ENST00000363205 127 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 SNORD115-20-201ENST00000365099 82 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 Y_RNA.362-201ENST00000365518 110 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 Y_RNA.470-201ENST00000384307 117 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 SNORD77B-201ENST00000391112 67 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 RNU6-602P-201ENST00000411155 105 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 MIR4679-2-201ENST00000578358 77 ntBASIC2.12□□□□□ -2.07
PRPF40AO75400 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PRPF40AO75400 SNORA63.5-201ENST00000363548 123 ntBASIC2.11□□□□□ -2.07
PRPF40AO75400 Y_RNA.281-201ENST00000364774 94 ntBASIC2.11□□□□□ -2.07
PRPF40AO75400 AC090844.1-201ENST00000422019 156 ntBASIC2.11□□□□□ -2.07
PRPF40AO75400 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.11□□□□□ -2.07
PRPF40AO75400 AC024614.2-201ENST00000577584 372 ntBASIC2.11□□□□□ -2.07
PRPF40AO75400 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.11□□□□□ -2.07
PRPF40AO75400 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PRPF40AO75400 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.11□□□□□ -2.07
PRPF40AO75400 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
PRPF40AO75400 SNORA63.4-201ENST00000362763 126 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 Y_RNA.549-201ENST00000384657 102 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 RNU1-78P-201ENST00000391248 165 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.1□□□□□ -2.07
PRPF40AO75400 AL591806.2-201ENST00000433122 173 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 AL133373.1-201ENST00000497098 94 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 MIR3664-201ENST00000579074 99 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 MIR4524B-201ENST00000581569 115 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 MIR548AE2-201ENST00000583456 67 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 AL161722.3-201ENST00000605789 2983 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 MIR8065-201ENST00000620577 100 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 AL035470.1-201ENST00000622571 220 ntBASIC2.1□□□□□ -2.07
PRPF40AO75400 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PRPF40AO75400 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PRPF40AO75400 Y_RNA.49-201ENST00000362714 112 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 RNU6-396P-201ENST00000365369 105 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 SNORA32-201ENST00000384072 121 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 MIR934-201ENST00000401241 83 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 RNA5SP445-201ENST00000515889 115 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 RNA5SP182-201ENST00000516064 82 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 AL512310.8-201ENST00000550183 120 ntBASIC2.09□□□□□ -2.07
PRPF40AO75400 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PRPF40AO75400 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.08□□□□□ -2.08
PRPF40AO75400 Y_RNA.85-201ENST00000363014 111 ntBASIC2.08□□□□□ -2.08
PRPF40AO75400 MIR764-201ENST00000390811 85 ntBASIC2.08□□□□□ -2.08
PRPF40AO75400 AC245517.4-201ENST00000448601 281 ntBASIC2.08□□□□□ -2.08
PRPF40AO75400 PDCD5P2-201ENST00000507570 312 ntBASIC2.08□□□□□ -2.08
PRPF40AO75400 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.08□□□□□ -2.08
PRPF40AO75400 MIR103A2-201ENST00000362154 78 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 RNU6-1107P-201ENST00000364817 104 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 Y_RNA.344-201ENST00000365381 112 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PRPF40AO75400 U8.13-201ENST00000390842 128 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.07□□□□□ -2.08
PRPF40AO75400 AL445685.2-201ENST00000422551 342 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 snoU13.23-201ENST00000458863 104 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 RNU6-295P-201ENST00000516901 104 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 MIR3122-201ENST00000577243 73 ntBASIC2.07□□□□□ -2.08
PRPF40AO75400 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRPF40AO75400 SNORA18-201ENST00000384416 132 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 RPL31P63-201ENST00000422565 375 ntBASIC2.06□□□□□ -2.08
PRPF40AO75400 MIR2115-201ENST00000516657 100 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 242.3 ms