Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 RNU6-291P-201ENST00000384720 107 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 RNA5SP261-201ENST00000410536 106 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 RNU6-938P-201ENST00000411285 103 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 AC096949.1-201ENST00000412047 152 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 RNU6-126P-201ENST00000516685 103 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 CR383656.4-201ENST00000546909 122 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 MIR3925-201ENST00000584674 77 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 AC010205.1-201ENST00000616668 449 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 U4.5-201ENST00000617137 123 ntBASIC-0.48□□□□□ -2.49
SHOX2O60902 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
SHOX2O60902 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 RNU6-370P-201ENST00000411008 104 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 RNU7-110P-201ENST00000516891 62 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
SHOX2O60902 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 AP001282.2-201ENST00000616149 309 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 AL662814.1-201ENST00000617364 121 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 MIR1246-201ENST00000636535 73 ntBASIC-0.49□□□□□ -2.49
SHOX2O60902 RNU6-899P-201ENST00000363947 107 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 RNU4-16P-201ENST00000364737 141 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 MIR496-201ENST00000385226 102 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 SNORA3B-201ENST00000391305 131 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 RNU2-11P-201ENST00000459191 187 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 RNU6-998P-201ENST00000515894 101 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 MIR4263-201ENST00000584745 83 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 AL021707.8-201ENST00000609428 183 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 U7.6-201ENST00000610841 64 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 AC122108.2-201ENST00000611946 526 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 SNORA70.25-201ENST00000612741 95 ntBASIC-0.5□□□□□ -2.49
SHOX2O60902 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 SNORD24-201ENST00000383884 75 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 U8.15-201ENST00000390947 134 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 RNU2-14P-201ENST00000411053 191 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 AL160004.2-201ENST00000432935 350 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 AC099799.1-201ENST00000439809 192 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.51□□□□□ -2.49
SHOX2O60902 RNU6-120P-201ENST00000516077 103 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 RNU2-31P-201ENST00000516954 155 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 AP003072.1-201ENST00000531740 145 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 MTND5P34-201ENST00000568888 325 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 MIR3145-201ENST00000580727 82 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 AL442067.1-201ENST00000613261 223 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 AL162726.3-218ENST00000636401 95 ntBASIC-0.51□□□□□ -2.49
SHOX2O60902 RNU6-653P-201ENST00000363074 106 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6-801P-201ENST00000364087 105 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNY3P11-201ENST00000364153 102 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6-535P-201ENST00000384722 107 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNY4P36-201ENST00000391116 96 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 MIR876-201ENST00000401147 81 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6-732P-201ENST00000516033 103 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6-693P-201ENST00000516134 107 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU2-60P-201ENST00000517290 128 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 MIR4491-201ENST00000581087 68 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 MIR4677-201ENST00000584153 80 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 VN1R91P-201ENST00000594377 169 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 AL133255.1-201ENST00000606374 441 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 AC103591.3-201ENST00000608684 209 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 MIR6514-201ENST00000622549 70 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 AC138305.3-201ENST00000624988 240 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 MIR3688-2-201ENST00000636963 87 ntBASIC-0.52□□□□□ -2.49
SHOX2O60902 RNU6-21P-201ENST00000384710 107 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.53□□□□□ -2.49
SHOX2O60902 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.53□□□□□ -2.49
SHOX2O60902 MIR5706-201ENST00000579841 80 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 MIR5690-201ENST00000583739 73 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 MIR6717-201ENST00000622747 73 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 AL162376.1-201ENST00000624117 175 ntBASIC-0.53□□□□□ -2.49
SHOX2O60902 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 RNU6-726P-201ENST00000364680 107 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 RNU6-708P-201ENST00000384217 107 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 SNORA26.6-201ENST00000391256 115 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.54□□□□□ -2.5
SHOX2O60902 AC244250.2-201ENST00000418731 148 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 AL500527.2-201ENST00000454105 95 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 RNU6-475P-201ENST00000516073 104 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 SNORD77.4-201ENST00000516158 81 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms