Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 MIR570-201ENST00000384917 97 ntBASIC1.52□□□□□ -2.17
CTIFO43310 MIR520C-201ENST00000385005 87 ntBASIC1.52□□□□□ -2.17
CTIFO43310 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
CTIFO43310 RNU6-240P-201ENST00000516098 97 ntBASIC1.52□□□□□ -2.17
CTIFO43310 AC133485.4-201ENST00000561835 220 ntBASIC1.52□□□□□ -2.17
CTIFO43310 AC138907.4-201ENST00000570107 226 ntBASIC1.52□□□□□ -2.17
CTIFO43310 HSPE1P19-201ENST00000603327 295 ntBASIC1.52□□□□□ -2.17
CTIFO43310 AL121890.5-201ENST00000620848 304 ntBASIC1.52□□□□□ -2.17
CTIFO43310 AL596211.1-201ENST00000569873 2277 ntBASIC1.52□□□□□ -2.17
CTIFO43310 RNU6-349P-201ENST00000362402 107 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RNU1-133P-201ENST00000364867 167 ntBASIC1.51□□□□□ -2.17
CTIFO43310 SNORD58C-201ENST00000365223 64 ntBASIC1.51□□□□□ -2.17
CTIFO43310 Y_RNA.370-201ENST00000365589 108 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RPS27P16-201ENST00000425758 201 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RPL39P39-201ENST00000455840 151 ntBASIC1.51□□□□□ -2.17
CTIFO43310 AC107297.1-201ENST00000459991 176 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RPS29P24-201ENST00000486345 171 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RNU6-998P-201ENST00000515894 101 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RNU2-13P-201ENST00000515909 113 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RN7SKP19-201ENST00000516016 252 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RN7SKP179-201ENST00000516126 217 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RNA5SP220-201ENST00000516298 104 ntBASIC1.51□□□□□ -2.17
CTIFO43310 SNORD111.1-201ENST00000516421 86 ntBASIC1.51□□□□□ -2.17
CTIFO43310 RNU7-70P-201ENST00000516941 66 ntBASIC1.51□□□□□ -2.17
CTIFO43310 AL512310.8-201ENST00000550183 120 ntBASIC1.51□□□□□ -2.17
CTIFO43310 MIR3664-201ENST00000579074 99 ntBASIC1.51□□□□□ -2.17
CTIFO43310 AL359881.1-201ENST00000602916 267 ntBASIC1.51□□□□□ -2.17
CTIFO43310 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CTIFO43310 MIR3914-2-201ENST00000637339 95 ntBASIC1.51□□□□□ -2.17
CTIFO43310 Y_RNA.563-201ENST00000384707 108 ntBASIC1.5□□□□□ -2.17
CTIFO43310 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
CTIFO43310 RNU7-96P-201ENST00000459535 64 ntBASIC1.5□□□□□ -2.17
CTIFO43310 RNU7-80P-201ENST00000459562 61 ntBASIC1.5□□□□□ -2.17
CTIFO43310 RNU6-947P-201ENST00000516264 106 ntBASIC1.5□□□□□ -2.17
CTIFO43310 RNU6-113P-201ENST00000516653 101 ntBASIC1.5□□□□□ -2.17
CTIFO43310 MIR4764-201ENST00000580680 88 ntBASIC1.5□□□□□ -2.17
CTIFO43310 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
CTIFO43310 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.5□□□□□ -2.17
CTIFO43310 AL161722.3-201ENST00000605789 2983 ntBASIC1.5□□□□□ -2.17
CTIFO43310 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.49□□□□□ -2.17
CTIFO43310 RNU4-16P-201ENST00000364737 141 ntBASIC1.49□□□□□ -2.17
CTIFO43310 RNU6-690P-201ENST00000365242 106 ntBASIC1.49□□□□□ -2.17
CTIFO43310 RNY1P6-201ENST00000384193 109 ntBASIC1.49□□□□□ -2.17
CTIFO43310 MIRLET7F2-201ENST00000385277 83 ntBASIC1.49□□□□□ -2.17
CTIFO43310 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CTIFO43310 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
CTIFO43310 RNU2-11P-201ENST00000459191 187 ntBASIC1.49□□□□□ -2.17
CTIFO43310 AL137067.1-201ENST00000615933 120 ntBASIC1.49□□□□□ -2.17
CTIFO43310 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
CTIFO43310 Y_RNA.353-201ENST00000365440 108 ntBASIC1.48□□□□□ -2.17
CTIFO43310 Y_RNA.454-201ENST00000384224 113 ntBASIC1.48□□□□□ -2.17
CTIFO43310 MIR1263-201ENST00000408324 86 ntBASIC1.48□□□□□ -2.17
CTIFO43310 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.48□□□□□ -2.17
CTIFO43310 AL035398.1-201ENST00000430869 322 ntBASIC1.48□□□□□ -2.17
CTIFO43310 RNU7-45P-201ENST00000459460 63 ntBASIC1.48□□□□□ -2.17
CTIFO43310 SNORD33.1-201ENST00000516213 88 ntBASIC1.48□□□□□ -2.17
CTIFO43310 RNU6-958P-201ENST00000516995 106 ntBASIC1.48□□□□□ -2.17
CTIFO43310 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.48□□□□□ -2.17
CTIFO43310 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.48□□□□□ -2.17
CTIFO43310 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.48□□□□□ -2.17
CTIFO43310 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CTIFO43310 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.47□□□□□ -2.17
CTIFO43310 RNA5SP325-201ENST00000363756 130 ntBASIC1.47□□□□□ -2.17
CTIFO43310 SNORA24-201ENST00000384096 131 ntBASIC1.47□□□□□ -2.17
CTIFO43310 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
CTIFO43310 Y_RNA.629-201ENST00000411368 105 ntBASIC1.47□□□□□ -2.17
CTIFO43310 RNU7-67P-201ENST00000459003 62 ntBASIC1.47□□□□□ -2.17
CTIFO43310 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
CTIFO43310 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
CTIFO43310 MIR4791-201ENST00000607666 84 ntBASIC1.47□□□□□ -2.17
CTIFO43310 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
CTIFO43310 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
CTIFO43310 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
CTIFO43310 AC243994.1-201ENST00000618627 109 ntBASIC1.47□□□□□ -2.17
CTIFO43310 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
CTIFO43310 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CTIFO43310 Y_RNA.273-201ENST00000364703 102 ntBASIC1.46□□□□□ -2.18
CTIFO43310 Y_RNA.327-201ENST00000365201 102 ntBASIC1.46□□□□□ -2.18
CTIFO43310 MIR517C-201ENST00000385103 95 ntBASIC1.46□□□□□ -2.18
CTIFO43310 RNU6-913P-201ENST00000390913 95 ntBASIC1.46□□□□□ -2.18
CTIFO43310 MIR1276-201ENST00000408707 83 ntBASIC1.46□□□□□ -2.18
CTIFO43310 RNU6-1190P-201ENST00000410811 104 ntBASIC1.46□□□□□ -2.18
CTIFO43310 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
CTIFO43310 AC025166.1-201ENST00000612411 163 ntBASIC1.46□□□□□ -2.18
CTIFO43310 AC008133.2-201ENST00000624540 351 ntBASIC1.46□□□□□ -2.18
CTIFO43310 MIR302B-201ENST00000362188 73 ntBASIC1.45□□□□□ -2.18
CTIFO43310 SNORA70.7-201ENST00000384159 133 ntBASIC1.45□□□□□ -2.18
CTIFO43310 Y_RNA.537-201ENST00000384626 109 ntBASIC1.45□□□□□ -2.18
CTIFO43310 Y_RNA.540-201ENST00000384638 111 ntBASIC1.45□□□□□ -2.18
CTIFO43310 RNY4P20-201ENST00000516678 93 ntBASIC1.45□□□□□ -2.18
CTIFO43310 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
CTIFO43310 AC021443.1-201ENST00000604478 211 ntBASIC1.45□□□□□ -2.18
CTIFO43310 AL096861.1-201ENST00000610899 123 ntBASIC1.45□□□□□ -2.18
CTIFO43310 U6.95-201ENST00000636931 70 ntBASIC1.45□□□□□ -2.18
CTIFO43310 MTND5P18-201ENST00000445624 1801 ntBASIC1.45□□□□□ -2.18
CTIFO43310 SNORA51.10-201ENST00000384418 136 ntBASIC1.44□□□□□ -2.18
CTIFO43310 SNORD20-201ENST00000384550 80 ntBASIC1.44□□□□□ -2.18
CTIFO43310 RNU6-429P-201ENST00000384582 108 ntBASIC1.44□□□□□ -2.18
CTIFO43310 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms