Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU6-235P-201ENST00000362644 107 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 RNA5SP99-201ENST00000364020 114 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 SNORD79.1-201ENST00000516069 84 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 MIR3910-1-201ENST00000580936 111 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 MIR3124-201ENST00000582636 67 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 U7.2-201ENST00000607576 63 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 SEPT14P17-201ENST00000617978 177 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 MIR6717-201ENST00000622747 73 ntBASIC1.38□□□□□ -2.19
PHGDHO43175 RNY1P6-201ENST00000384193 109 ntBASIC1.37□□□□□ -2.19
PHGDHO43175 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
PHGDHO43175 AC021613.1-201ENST00000623880 111 ntBASIC1.37□□□□□ -2.19
PHGDHO43175 MIR6516-201ENST00000630554 81 ntBASIC1.37□□□□□ -2.19
PHGDHO43175 Z97988.1-201ENST00000637697 135 ntBASIC1.37□□□□□ -2.19
PHGDHO43175 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.36□□□□□ -2.19
PHGDHO43175 RNU6-690P-201ENST00000365242 106 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 Y_RNA.366-201ENST00000365540 102 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PHGDHO43175 RNU4-61P-201ENST00000411243 107 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 RNU6-1234P-201ENST00000516877 103 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 IGKV1-22-201ENST00000524313 326 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 MIR3152-201ENST00000579801 74 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 TUG1_4.1-201ENST00000619464 181 ntBASIC1.36□□□□□ -2.19
PHGDHO43175 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
PHGDHO43175 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
PHGDHO43175 RNU6-654P-201ENST00000364373 107 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 SNORD38B-201ENST00000384690 67 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 RNU6-1319P-201ENST00000390855 104 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 RNU6-747P-201ENST00000390928 104 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 RNU6-241P-201ENST00000391148 104 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 RNU6-177P-201ENST00000411257 104 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 MRPL35P3-201ENST00000421557 364 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 AC244023.1-201ENST00000426884 112 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 AL158147.1-201ENST00000443970 75 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 TMSB4XP3-201ENST00000445144 114 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
PHGDHO43175 RNA5SP458-201ENST00000516188 119 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 RNU6-1258P-201ENST00000516911 111 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 Y_RNA.757-201ENST00000578934 114 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 AP000753.3-201ENST00000604083 169 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 AC242498.1-201ENST00000604134 111 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 SNORD38B-202ENST00000625943 69 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 AC008163.1-202ENST00000636004 2889 ntBASIC1.35□□□□□ -2.19
PHGDHO43175 Y_RNA.280-201ENST00000364765 112 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 Y_RNA.525-201ENST00000384570 113 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 RNU6-613P-201ENST00000410412 108 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 RPS3AP1-201ENST00000413190 320 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.34□□□□□ -2.19
PHGDHO43175 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 AC133485.4-201ENST00000561835 220 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 AC138907.4-201ENST00000570107 226 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
PHGDHO43175 Y_RNA.140-201ENST00000363474 103 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 Y_RNA.171-201ENST00000363760 102 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 Y_RNA.218-201ENST00000364218 104 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 MIR758-201ENST00000390227 88 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 POLR2J4-204ENST00000418424 324 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 AC063976.4-201ENST00000421971 163 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 RNU2-35P-201ENST00000516446 142 ntBASIC1.33□□□□□ -2.2
PHGDHO43175 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PHGDHO43175 Y_RNA.354-201ENST00000365448 111 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RNU6-81P-201ENST00000365608 104 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 SNORD12C-201ENST00000386307 89 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RNA5SP144-201ENST00000410846 116 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 AL512326.2-201ENST00000426359 151 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RNU7-107P-201ENST00000459121 61 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RN7SKP19-201ENST00000516016 252 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RNU6-781P-201ENST00000516377 101 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RNU7-40P-201ENST00000516397 64 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 RNU6-113P-201ENST00000516653 101 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 AC023827.1-201ENST00000569247 97 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 MIR4305-201ENST00000583252 102 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 AL137067.1-201ENST00000615933 120 ntBASIC1.32□□□□□ -2.2
PHGDHO43175 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
PHGDHO43175 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
PHGDHO43175 SNORA22.1-201ENST00000362701 134 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 Y_RNA.71-201ENST00000362892 104 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 SNORA2B-201ENST00000384583 137 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 MT-TN-201ENST00000387400 73 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 RNU6-205P-201ENST00000390858 107 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 AC108667.1-201ENST00000428618 249 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 RNU1-123P-201ENST00000458950 160 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 MIR4264-201ENST00000583520 66 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 AC021443.1-201ENST00000604478 211 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 MIR6841-201ENST00000637129 72 ntBASIC1.31□□□□□ -2.2
PHGDHO43175 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
PHGDHO43175 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
PHGDHO43175 AL157777.2-201ENST00000258070 137 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 MIR539-201ENST00000365690 78 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 Y_RNA.430-201ENST00000384081 110 ntBASIC1.3□□□□□ -2.2
PHGDHO43175 RNU6-959P-201ENST00000384671 107 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms