Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-408P-201ENST00000515910 100 ntBASIC-2.23□□□□□ -2.77
CHD1O14646 AC019193.3-201ENST00000609144 554 ntBASIC-2.23□□□□□ -2.77
CHD1O14646 SNORD113-7-201ENST00000363762 77 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 RNU6-879P-201ENST00000364328 108 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 Y_RNA.436-201ENST00000384097 102 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 MIR1278-201ENST00000408753 81 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 AL080274.1-201ENST00000605565 220 ntBASIC-2.24□□□□□ -2.77
CHD1O14646 RNU6-595P-201ENST00000363944 107 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 RNU6-553P-201ENST00000364047 96 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 SNORA18-201ENST00000384416 132 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-2.25□□□□□ -2.77
CHD1O14646 RNU6-831P-201ENST00000384548 107 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 RNU6-893P-201ENST00000458841 100 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-2.25□□□□□ -2.77
CHD1O14646 MIR4500-201ENST00000579472 76 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 U6.109-201ENST00000636749 87 ntBASIC-2.25□□□□□ -2.77
CHD1O14646 MIR29B1-201ENST00000385015 81 ntBASIC-2.26□□□□□ -2.77
CHD1O14646 AL121655.1-201ENST00000605811 308 ntBASIC-2.26□□□□□ -2.77
CHD1O14646 RNU6-1257P-201ENST00000384625 110 ntBASIC-2.27□□□□□ -2.77
CHD1O14646 Y_RNA.557-201ENST00000384680 107 ntBASIC-2.27□□□□□ -2.77
CHD1O14646 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.27□□□□□ -2.77
CHD1O14646 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-2.27□□□□□ -2.77
CHD1O14646 MTATP6P13-201ENST00000438531 667 ntBASIC-2.28□□□□□ -2.77
CHD1O14646 AC097635.1-201ENST00000450678 155 ntBASIC-2.28□□□□□ -2.77
CHD1O14646 MIR6818-201ENST00000621576 65 ntBASIC-2.28□□□□□ -2.77
CHD1O14646 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.28□□□□□ -2.78
CHD1O14646 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.28□□□□□ -2.78
CHD1O14646 RNU6-588P-201ENST00000410281 105 ntBASIC-2.28□□□□□ -2.78
CHD1O14646 AC084290.1-201ENST00000434995 374 ntBASIC-2.28□□□□□ -2.78
CHD1O14646 CCDC34P1-201ENST00000507441 517 ntBASIC-2.28□□□□□ -2.78
CHD1O14646 MIR4424-201ENST00000585257 86 ntBASIC-2.28□□□□□ -2.78
CHD1O14646 RNU4-80P-201ENST00000363200 141 ntBASIC-2.29□□□□□ -2.78
CHD1O14646 RNU6-961P-201ENST00000363893 105 ntBASIC-2.29□□□□□ -2.78
CHD1O14646 RNU6-128P-201ENST00000383976 107 ntBASIC-2.29□□□□□ -2.78
CHD1O14646 Y_RNA.665-201ENST00000516177 98 ntBASIC-2.29□□□□□ -2.78
CHD1O14646 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.29□□□□□ -2.78
CHD1O14646 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-2.29□□□□□ -2.78
CHD1O14646 AC127455.1-201ENST00000565496 145 ntBASIC-2.29□□□□□ -2.78
CHD1O14646 SNORA2.1-201ENST00000363089 137 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 Y_RNA.364-201ENST00000365532 101 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 RNU4-20P-201ENST00000365601 151 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 SNORA20-201ENST00000384662 132 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 MIR548A2-201ENST00000384956 97 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 SNORD12B-201ENST00000410433 91 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 BX295541.1-201ENST00000417774 250 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 RNU7-45P-201ENST00000459460 63 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 RNU7-80P-201ENST00000459562 61 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 U4.1-201ENST00000620349 87 ntBASIC-2.3□□□□□ -2.78
CHD1O14646 RNU6-484P-201ENST00000384016 107 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 SNORA36B-201ENST00000410438 131 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 MIR2355-201ENST00000517199 87 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 MIR548AG2-201ENST00000581228 64 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 AC018638.8-201ENST00000588755 281 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 RNU4-68P-201ENST00000364314 141 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 SNORD115-27-201ENST00000364430 82 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 Y_RNA.378-201ENST00000365652 113 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 RNU6-412P-201ENST00000516434 106 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 DLEU2_5.1-201ENST00000615567 84 ntBASIC-2.31□□□□□ -2.78
CHD1O14646 Y_RNA.634-201ENST00000364811 113 ntBASIC-2.32□□□□□ -2.78
CHD1O14646 RNY1P2-201ENST00000364820 117 ntBASIC-2.32□□□□□ -2.78
CHD1O14646 RNU6-596P-201ENST00000365395 98 ntBASIC-2.32□□□□□ -2.78
CHD1O14646 Y_RNA.482-201ENST00000384377 111 ntBASIC-2.32□□□□□ -2.78
CHD1O14646 RNU4-61P-201ENST00000411243 107 ntBASIC-2.32□□□□□ -2.78
CHD1O14646 AP001506.1-201ENST00000615444 211 ntBASIC-2.32□□□□□ -2.78
CHD1O14646 Y_RNA.10-201ENST00000362371 110 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 RNU4-50P-201ENST00000364361 141 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 RNU6-83P-201ENST00000384568 112 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 RNU7-63P-201ENST00000459054 62 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 RNU7-87P-201ENST00000459343 62 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 RNU6-1038P-201ENST00000516516 104 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 AC007012.1-201ENST00000567192 175 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 MIR548AY-201ENST00000617669 107 ntBASIC-2.33□□□□□ -2.78
CHD1O14646 RNU6-1189P-201ENST00000383958 107 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 MIR507-201ENST00000385234 94 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 RNU6-365P-201ENST00000517113 106 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 RNU7-35P-201ENST00000517174 62 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 MIR664B-201ENST00000626756 61 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 RNU6-318P-201ENST00000384283 103 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 SNORD36C-201ENST00000516733 66 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 UBE2V2P2-201ENST00000587677 504 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 AC124303.1-201ENST00000605703 360 ntBASIC-2.34□□□□□ -2.78
CHD1O14646 RNU6-571P-201ENST00000384128 107 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 Y_RNA.566-201ENST00000384735 101 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 MIR190B-201ENST00000401119 79 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 AC108019.1-201ENST00000512540 175 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 RNU6-126P-201ENST00000516685 103 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 AC027449.1-201ENST00000608890 407 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 AL138960.2-201ENST00000625145 535 ntBASIC-2.35□□□□□ -2.79
CHD1O14646 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.35□□□□□ -2.79
CHD1O14646 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.36□□□□□ -2.79
CHD1O14646 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.36□□□□□ -2.79
CHD1O14646 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.36□□□□□ -2.79
CHD1O14646 AC024067.1-201ENST00000426199 223 ntBASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms