Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC011921.3-201ENST00000605540 361 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 AL442067.1-201ENST00000613261 223 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 AL365265.1-201ENST00000621045 234 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 MIR6513-201ENST00000621188 64 ntBASIC0.35□□□□□ -2.35
SLC28A1O00337 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
SLC28A1O00337 RNU6-238P-201ENST00000363313 106 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 Y_RNA.351-201ENST00000365436 96 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 MIR548F4-201ENST00000408515 105 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 MIR8062-201ENST00000621515 85 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 MIR6717-201ENST00000622747 73 ntBASIC0.34□□□□□ -2.36
SLC28A1O00337 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
SLC28A1O00337 Y_RNA.76-201ENST00000362931 109 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 Y_RNA.396-201ENST00000383949 103 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 Y_RNA.461-201ENST00000384263 103 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 Y_RNA.518-201ENST00000384552 113 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 Y_RNA.542-201ENST00000384641 111 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 SNORA79-201ENST00000408376 140 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 RNU7-80P-201ENST00000459562 61 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.33□□□□□ -2.36
SLC28A1O00337 MIR3129-201ENST00000581095 76 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 U6.104-201ENST00000637979 90 ntBASIC0.33□□□□□ -2.36
SLC28A1O00337 MIR335-201ENST00000362173 94 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 RNU1-133P-201ENST00000364867 167 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 Y_RNA.326-201ENST00000365176 113 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 RNA5SP117-201ENST00000365294 118 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 Y_RNA.454-201ENST00000384224 113 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SLC28A1O00337 RNA5SP237-201ENST00000410414 113 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 SNORD71-201ENST00000411292 86 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.32□□□□□ -2.36
SLC28A1O00337 RPL39P25-201ENST00000449384 154 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 SNORA25.12-201ENST00000516202 82 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 MIR5197-201ENST00000583721 112 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 MIR6734-201ENST00000621166 68 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 uc_338.16-201ENST00000621804 95 ntBASIC0.32□□□□□ -2.36
SLC28A1O00337 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 RNU6-728P-201ENST00000365375 104 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 MIR216A-201ENST00000385063 110 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 RNY3P16-201ENST00000516338 101 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 RNA5SP94-201ENST00000516917 108 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 RNU6-448P-201ENST00000517052 107 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 Y_RNA.720-201ENST00000517166 92 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 AC091932.4-201ENST00000623386 200 ntBASIC0.31□□□□□ -2.36
SLC28A1O00337 Y_RNA.176-201ENST00000363815 109 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 RNA5SP517-201ENST00000364724 117 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 RNU4-17P-201ENST00000365598 141 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 RNU6-42P-201ENST00000384165 107 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 Y_RNA.574-201ENST00000384766 95 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 SNORD93-201ENST00000408813 74 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 SNORA4-201ENST00000584302 138 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.3□□□□□ -2.36
SLC28A1O00337 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.3□□□□□ -2.36
SLC28A1O00337 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 Y_RNA.277-201ENST00000364754 102 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 RNU6-1160P-201ENST00000384546 104 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 MIR518A1-201ENST00000385068 85 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 MIR1302-6-201ENST00000408466 90 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 RNU2-38P-201ENST00000410856 79 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 Y_RNA.617-201ENST00000410920 90 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 Y_RNA.618-201ENST00000410949 107 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 AC096949.1-201ENST00000412047 152 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.29□□□□□ -2.36
SLC28A1O00337 MIR3152-201ENST00000579801 74 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 MIR8066-201ENST00000617280 78 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 AL596211.1-201ENST00000569873 2277 ntBASIC0.29□□□□□ -2.36
SLC28A1O00337 RNU6-978P-201ENST00000364371 103 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 Y_RNA.430-201ENST00000384081 110 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 SNORA20-201ENST00000384662 132 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 MIR1287-201ENST00000408492 90 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 RNU4-83P-201ENST00000410863 133 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 MIR3678-201ENST00000578455 94 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 AL662814.1-201ENST00000617364 121 ntBASIC0.28□□□□□ -2.36
SLC28A1O00337 Y_RNA.42-201ENST00000362660 108 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 RNU6-1292P-201ENST00000383856 107 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 Y_RNA.422-201ENST00000384054 114 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 MIR606-201ENST00000384851 96 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 MIR936-201ENST00000401264 98 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 MIR4711-201ENST00000578274 70 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 AL365205.2-201ENST00000594586 68 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 SNORA25.18-201ENST00000607153 114 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 MIR6841-201ENST00000637129 72 ntBASIC0.27□□□□□ -2.37
SLC28A1O00337 Y_RNA.54-201ENST00000362766 105 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 RNU6-103P-201ENST00000363686 107 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 Y_RNA.262-201ENST00000364641 102 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 Y_RNA.292-201ENST00000364904 97 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 U8.15-201ENST00000390947 134 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 RNU4-43P-201ENST00000410628 137 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 SEPT7P4-201ENST00000437076 306 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 RNU6-469P-201ENST00000516253 101 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 SCARNA15-202ENST00000516881 127 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms