Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AL161722.3-201ENST00000605789 2983 ntBASIC2.94□□□□□ -1.94
H3BM21 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.94□□□□□ -1.94
H3BM21 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
H3BM21 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
H3BM21 RNU6-1237P-201ENST00000384777 107 ntBASIC2.94□□□□□ -1.94
H3BM21 AL139132.1-201ENST00000431587 344 ntBASIC2.94□□□□□ -1.94
H3BM21 RNU7-12P-201ENST00000516030 62 ntBASIC2.94□□□□□ -1.94
H3BM21 RNA5SP168-201ENST00000516642 112 ntBASIC2.94□□□□□ -1.94
H3BM21 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.94□□□□□ -1.94
H3BM21 MIR4511-201ENST00000582784 87 ntBASIC2.94□□□□□ -1.94
H3BM21 AL627230.6-201ENST00000611129 280 ntBASIC2.94□□□□□ -1.94
H3BM21 AC103706.3-201ENST00000636297 85 ntBASIC2.94□□□□□ -1.94
H3BM21 Z97988.1-201ENST00000637697 135 ntBASIC2.94□□□□□ -1.94
H3BM21 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
H3BM21 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
H3BM21 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
H3BM21 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
H3BM21 RNU6-154P-201ENST00000384306 106 ntBASIC2.93□□□□□ -1.94
H3BM21 Y_RNA.537-201ENST00000384626 109 ntBASIC2.93□□□□□ -1.94
H3BM21 MIR548U-201ENST00000390728 81 ntBASIC2.93□□□□□ -1.94
H3BM21 SNORD90-201ENST00000391145 111 ntBASIC2.93□□□□□ -1.94
H3BM21 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
H3BM21 RNU6-977P-201ENST00000516411 103 ntBASIC2.93□□□□□ -1.94
H3BM21 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
H3BM21 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
H3BM21 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.92□□□□□ -1.94
H3BM21 RNU6-681P-201ENST00000364012 104 ntBASIC2.92□□□□□ -1.94
H3BM21 RNY1P2-201ENST00000364820 117 ntBASIC2.92□□□□□ -1.94
H3BM21 AC110620.1-201ENST00000416042 228 ntBASIC2.92□□□□□ -1.94
H3BM21 RPS27P21-201ENST00000486977 252 ntBASIC2.92□□□□□ -1.94
H3BM21 RNU6-75P-201ENST00000515944 104 ntBASIC2.92□□□□□ -1.94
H3BM21 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.92□□□□□ -1.94
H3BM21 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
H3BM21 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
H3BM21 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
H3BM21 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
H3BM21 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
H3BM21 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
H3BM21 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.91□□□□□ -1.94
H3BM21 RNU6-669P-201ENST00000365575 107 ntBASIC2.91□□□□□ -1.94
H3BM21 SNORD45A-201ENST00000384512 84 ntBASIC2.91□□□□□ -1.94
H3BM21 RNU6-1072P-201ENST00000384703 107 ntBASIC2.91□□□□□ -1.94
H3BM21 RNU6-443P-201ENST00000384780 107 ntBASIC2.91□□□□□ -1.94
H3BM21 AL034345.1-201ENST00000407768 123 ntBASIC2.91□□□□□ -1.94
H3BM21 HSPE1P9-201ENST00000440046 311 ntBASIC2.91□□□□□ -1.94
H3BM21 RNA5SP356-201ENST00000515972 94 ntBASIC2.91□□□□□ -1.94
H3BM21 GTF3AP2-201ENST00000557014 266 ntBASIC2.91□□□□□ -1.94
H3BM21 MIR4500-201ENST00000579472 76 ntBASIC2.91□□□□□ -1.94
H3BM21 AL357312.1-201ENST00000603879 298 ntBASIC2.91□□□□□ -1.94
H3BM21 AC069114.2-201ENST00000604699 304 ntBASIC2.91□□□□□ -1.94
H3BM21 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.91□□□□□ -1.94
H3BM21 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
H3BM21 MIR449A-201ENST00000362113 91 ntBASIC2.9□□□□□ -1.95
H3BM21 Y_RNA.283-201ENST00000364798 112 ntBASIC2.9□□□□□ -1.95
H3BM21 RNU6-1067P-201ENST00000384752 107 ntBASIC2.9□□□□□ -1.95
H3BM21 AC105272.1-201ENST00000438604 198 ntBASIC2.9□□□□□ -1.95
H3BM21 RN7SKP132-201ENST00000516001 208 ntBASIC2.9□□□□□ -1.95
H3BM21 SNORD92-201ENST00000585078 85 ntBASIC2.9□□□□□ -1.95
H3BM21 AL355297.2-201ENST00000604792 129 ntBASIC2.9□□□□□ -1.95
H3BM21 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.95
H3BM21 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
H3BM21 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
H3BM21 MIR337-201ENST00000362281 93 ntBASIC2.89□□□□□ -1.95
H3BM21 RNA5SP493-201ENST00000364115 91 ntBASIC2.89□□□□□ -1.95
H3BM21 RNU6-1019P-201ENST00000364424 107 ntBASIC2.89□□□□□ -1.95
H3BM21 RNU6-571P-201ENST00000384128 107 ntBASIC2.89□□□□□ -1.95
H3BM21 MIR561-201ENST00000385216 97 ntBASIC2.89□□□□□ -1.95
H3BM21 AC027119.1-201ENST00000440877 241 ntBASIC2.89□□□□□ -1.95
H3BM21 UBBP3-201ENST00000445497 241 ntBASIC2.89□□□□□ -1.95
H3BM21 AC018868.1-201ENST00000491307 315 ntBASIC2.89□□□□□ -1.95
H3BM21 AC104984.5-201ENST00000586878 94 ntBASIC2.89□□□□□ -1.95
H3BM21 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.89□□□□□ -1.95
H3BM21 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
H3BM21 MIRLET7F1-201ENST00000362202 87 ntBASIC2.88□□□□□ -1.95
H3BM21 RNA5SP432-201ENST00000362480 116 ntBASIC2.88□□□□□ -1.95
H3BM21 RNU6-291P-201ENST00000384720 107 ntBASIC2.88□□□□□ -1.95
H3BM21 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
H3BM21 SNORA11.4-201ENST00000408823 129 ntBASIC2.88□□□□□ -1.95
H3BM21 RNU2-7P-201ENST00000410794 178 ntBASIC2.88□□□□□ -1.95
H3BM21 Z96811.1-201ENST00000445880 108 ntBASIC2.88□□□□□ -1.95
H3BM21 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.88□□□□□ -1.95
H3BM21 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
H3BM21 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.88□□□□□ -1.95
H3BM21 CYP3A52P-201ENST00000563326 91 ntBASIC2.88□□□□□ -1.95
H3BM21 AC141846.1-201ENST00000568348 142 ntBASIC2.88□□□□□ -1.95
H3BM21 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.88□□□□□ -1.95
H3BM21 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.88□□□□□ -1.95
H3BM21 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.87□□□□□ -1.95
H3BM21 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.87□□□□□ -1.95
H3BM21 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
H3BM21 SNORD36A-201ENST00000362874 73 ntBASIC2.87□□□□□ -1.95
H3BM21 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
H3BM21 RNA5SP492-201ENST00000411330 114 ntBASIC2.87□□□□□ -1.95
H3BM21 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
H3BM21 AC087499.2-201ENST00000432861 149 ntBASIC2.87□□□□□ -1.95
H3BM21 snoU13.17-201ENST00000458802 104 ntBASIC2.87□□□□□ -1.95
H3BM21 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.87□□□□□ -1.95
H3BM21 AC023141.11-201ENST00000508864 202 ntBASIC2.87□□□□□ -1.95
H3BM21 RNU6-881P-201ENST00000516813 102 ntBASIC2.87□□□□□ -1.95
H3BM21 MIR3945-201ENST00000581853 98 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms