Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RNU6-1319P-201ENST00000390855 104 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-747P-201ENST00000390928 104 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-241P-201ENST00000391148 104 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-177P-201ENST00000411257 104 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU7-67P-201ENST00000459003 62 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 UBL5P1-201ENST00000507979 193 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU7-28P-201ENST00000516759 62 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR3152-201ENST00000579801 74 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR4791-201ENST00000607666 84 ntBASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-633P-201ENST00000362612 103 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-2-201ENST00000362842 82 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-3-201ENST00000363100 82 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-27-201ENST00000364430 82 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD115-20-201ENST00000365099 82 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORA67.3-201ENST00000384366 140 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-160P-201ENST00000384591 107 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR1262-201ENST00000408276 93 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD14A-201ENST00000606526 91 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SEPT14P17-201ENST00000617978 177 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR8054-201ENST00000620877 86 ntBASIC2.12□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-457P-201ENST00000363999 107 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-1163P-201ENST00000364516 107 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORA25B-201ENST00000365507 128 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AL023284.1-201ENST00000403956 276 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR3124-201ENST00000582636 67 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR4439-201ENST00000583746 80 ntBASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIRLET7C-201ENST00000362160 84 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNA5SP493-201ENST00000364115 91 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.370-201ENST00000365589 108 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-524P-201ENST00000384270 107 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU6-1307P-201ENST00000391012 103 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR7843-201ENST00000622274 79 ntBASIC2.1□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 Y_RNA.140-201ENST00000363474 103 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 SNORA3A-201ENST00000364113 130 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 U8.16-201ENST00000391279 133 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RPS29P28-201ENST00000446439 141 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 RNU7-2P-201ENST00000516096 62 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR6717-201ENST00000622747 73 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 MIR6841-201ENST00000637129 72 ntBASIC2.09□□□□□ -2.07
C1QTNF3-AMACRE9PGA6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-23P-201ENST00000363283 107 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR34C-201ENST00000384831 77 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORA26.6-201ENST00000391256 115 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 HSPE1P9-201ENST00000440046 311 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU1-98P-201ENST00000458992 160 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORA31.10-201ENST00000516482 106 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU7-53P-201ENST00000516705 60 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR4712-201ENST00000583750 82 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC022513.1-201ENST00000624512 117 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORD38.1-201ENST00000363863 68 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORA1.2-201ENST00000365189 134 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORA70.7-201ENST00000384159 133 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-342P-201ENST00000384521 104 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR206-201ENST00000384872 86 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-913P-201ENST00000390913 95 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC003685.2-201ENST00000422795 395 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 HMGN1P33-201ENST00000432945 451 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RPS29P29-201ENST00000456396 171 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU7-12P-201ENST00000516030 62 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-1006P-201ENST00000516998 103 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORA28-201ENST00000606769 126 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC027279.3-201ENST00000625055 122 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 ZNF355P-201ENST00000427301 3216 ntBASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SPINT5P-201ENST00000448174 155 ntBASIC2.06□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC093850.1-201ENST00000454121 251 ntBASIC2.06□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 DNAJC19P9-201ENST00000555084 351 ntBASIC2.06□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-1244P-201ENST00000363614 108 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNU6-1229P-201ENST00000364295 107 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 Y_RNA.448-201ENST00000384185 108 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 Y_RNA.567-201ENST00000384736 106 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 SNORD28B-201ENST00000390993 75 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC019129.1-201ENST00000403786 261 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 MIR1289-2-201ENST00000408360 111 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RNA5SP261-201ENST00000410536 106 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 AC245047.7-201ENST00000440265 293 ntBASIC2.05□□□□□ -2.08
C1QTNF3-AMACRE9PGA6 RPL23AP42-201ENST00000471152 471 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms