Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.674-201ENST00000516362 113 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-1149P-201ENST00000516810 97 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 RNU2-60P-201ENST00000517290 128 ntBASIC0.68□□□□□ -2.3
TRIM49D1C9J1S8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 SNORA1.1-201ENST00000364671 133 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-1189P-201ENST00000383958 107 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.489-201ENST00000384410 101 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 MIR100-201ENST00000385259 80 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 SNORA40.5-201ENST00000391061 128 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 RNU2-55P-201ENST00000411146 174 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 RNU7-90P-201ENST00000459216 62 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 snoU13.18-201ENST00000459483 104 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-1258P-201ENST00000516911 111 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 MIR378D2-201ENST00000580636 98 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 AL365205.2-201ENST00000594586 68 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 MIR8055-201ENST00000610739 97 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 AC022709.1-201ENST00000615967 87 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 AC091932.4-201ENST00000623386 200 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 AL596211.1-201ENST00000569873 2277 ntBASIC0.67□□□□□ -2.3
TRIM49D1C9J1S8 AC010332.2-201ENST00000613083 1904 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.75-201ENST00000362927 97 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.118-201ENST00000363300 101 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-1130P-201ENST00000365434 107 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.401-201ENST00000383965 117 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 SNORD89-201ENST00000390981 114 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 RNU6-613P-201ENST00000410412 108 ntBASIC0.66□□□□□ -2.3
TRIM49D1C9J1S8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
TRIM49D1C9J1S8 Y_RNA.52-201ENST00000362760 96 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.121-201ENST00000363309 113 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-200P-201ENST00000364743 107 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 SNORA1.2-201ENST00000365189 134 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.351-201ENST00000365436 96 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.354-201ENST00000365448 111 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 AC087499.4-201ENST00000448505 178 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 AP002392.1-201ENST00000537692 208 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 AC020891.4-201ENST00000605745 93 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.150-201ENST00000363562 102 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.257-201ENST00000364596 102 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.476-201ENST00000384347 108 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 MIR489-201ENST00000384923 84 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 MT-TG-201ENST00000387429 68 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 SNORD12-201ENST00000391002 90 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 PCNPP3-201ENST00000393579 471 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-588P-201ENST00000410281 105 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.793-201ENST00000411222 111 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 RNU7-73P-201ENST00000458743 63 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 snoU13.16-201ENST00000459350 104 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 MIR5000-201ENST00000577717 103 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 Z97988.1-201ENST00000637697 135 ntBASIC0.64□□□□□ -2.31
TRIM49D1C9J1S8 SNORD114-24-201ENST00000365029 72 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.435-201ENST00000384095 112 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.618-201ENST00000410949 107 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 RPS3AP1-201ENST00000413190 320 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 RNU7-62P-201ENST00000458856 62 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 RNA5SP272-201ENST00000516095 111 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 RNA5SP236-201ENST00000516169 116 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 RNA5SP255-201ENST00000516370 107 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 SNORD116-25-201ENST00000516517 92 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.686-201ENST00000516548 134 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 MIR2115-201ENST00000516657 100 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 MIR4771-2-201ENST00000577758 74 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 MIR4431-201ENST00000579990 94 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 MIR4771-1-201ENST00000582617 74 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 MIR7111-201ENST00000619751 72 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 MIR6717-201ENST00000622747 73 ntBASIC0.63□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.171-201ENST00000363760 102 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 SNORD113.3-201ENST00000364630 78 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-396P-201ENST00000365369 105 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-342P-201ENST00000384521 104 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.521-201ENST00000384560 114 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.542-201ENST00000384641 111 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 MIR588-201ENST00000384900 83 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 RNU7-96P-201ENST00000459535 64 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 MIR4714-201ENST00000580728 77 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 AC008608.1-201ENST00000603910 127 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 AC004792.1-201ENST00000614523 137 ntBASIC0.62□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-1318P-201ENST00000365389 103 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.393-201ENST00000383936 102 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.410-201ENST00000383992 113 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-804P-201ENST00000384286 107 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.497-201ENST00000384447 98 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms