Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.01□□□□□ -1.93
RCCD1A6NED2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
RCCD1A6NED2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
RCCD1A6NED2 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 SNORA71.1-201ENST00000364523 117 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 SNORA9.2-201ENST00000365361 133 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 RNU6-380P-201ENST00000410207 107 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 RNA5SP270-201ENST00000411361 118 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 AL450471.1-201ENST00000447509 127 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 AC009474.2-201ENST00000451383 136 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 SNORA31.15-201ENST00000516771 132 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 DEFB122-202ENST00000569013 197 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 MIR4500-201ENST00000579472 76 ntBASIC3□□□□□ -1.93
RCCD1A6NED2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3□□□□□ -1.93
RCCD1A6NED2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RCCD1A6NED2 WWP1P1-201ENST00000466609 2769 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 RNA5SP48-201ENST00000363969 126 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 RNU4-83P-201ENST00000410863 133 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 snoU13.2-201ENST00000459201 104 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 SCARNA13-201ENST00000516672 275 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 RNU6-557P-201ENST00000516842 110 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 RNU6-850P-201ENST00000516934 103 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 MIR4325-201ENST00000583049 90 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 MIR4658-201ENST00000584344 65 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.99□□□□□ -1.93
RCCD1A6NED2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RCCD1A6NED2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
RCCD1A6NED2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.98□□□□□ -1.93
RCCD1A6NED2 Y_RNA.508-201ENST00000384502 114 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 MIR128-1-201ENST00000384921 82 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 SNORA48.2-201ENST00000390926 124 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 Y_RNA.648-201ENST00000459455 110 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 SNORA31.17-201ENST00000516953 127 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 MIR3605-201ENST00000583214 100 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 AL162274.2-201ENST00000614406 332 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.98□□□□□ -1.93
RCCD1A6NED2 RNU6-571P-201ENST00000384128 107 ntBASIC2.97□□□□□ -1.93
RCCD1A6NED2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.97□□□□□ -1.93
RCCD1A6NED2 RNU7-85P-201ENST00000458851 63 ntBASIC2.97□□□□□ -1.93
RCCD1A6NED2 SNORA9.3-201ENST00000516383 129 ntBASIC2.97□□□□□ -1.93
RCCD1A6NED2 AC138749.4-201ENST00000563970 127 ntBASIC2.97□□□□□ -1.93
RCCD1A6NED2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
RCCD1A6NED2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.97□□□□□ -1.93
RCCD1A6NED2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RCCD1A6NED2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RCCD1A6NED2 MIR422A-201ENST00000362286 90 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 RNU6-203P-201ENST00000384038 104 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 AC004965.1-201ENST00000413033 213 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 AC244023.1-201ENST00000426884 112 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 RNA5SP445-201ENST00000515889 115 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 RNA5SP341-201ENST00000516261 117 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 RNU6-56P-201ENST00000516986 93 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 AC242498.1-201ENST00000604134 111 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
RCCD1A6NED2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.95□□□□□ -1.94
RCCD1A6NED2 AC114801.3-201ENST00000510231 177 ntBASIC2.95□□□□□ -1.94
RCCD1A6NED2 MIR4796-201ENST00000580742 81 ntBASIC2.95□□□□□ -1.94
RCCD1A6NED2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RCCD1A6NED2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RCCD1A6NED2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.94□□□□□ -1.94
RCCD1A6NED2 RNU6-686P-201ENST00000364839 107 ntBASIC2.94□□□□□ -1.94
RCCD1A6NED2 MIR588-201ENST00000384900 83 ntBASIC2.94□□□□□ -1.94
RCCD1A6NED2 Z98742.3-201ENST00000418637 326 ntBASIC2.94□□□□□ -1.94
RCCD1A6NED2 SNORD111.1-201ENST00000516421 86 ntBASIC2.94□□□□□ -1.94
RCCD1A6NED2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.94□□□□□ -1.94
RCCD1A6NED2 U6.109-201ENST00000636749 87 ntBASIC2.94□□□□□ -1.94
RCCD1A6NED2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.94□□□□□ -1.94
RCCD1A6NED2 SNORA63.2-201ENST00000362603 126 ntBASIC2.93□□□□□ -1.94
RCCD1A6NED2 MIR194-1-201ENST00000384892 85 ntBASIC2.93□□□□□ -1.94
RCCD1A6NED2 AC004223.1-201ENST00000479840 271 ntBASIC2.93□□□□□ -1.94
RCCD1A6NED2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.93□□□□□ -1.94
RCCD1A6NED2 AL365361.1-201ENST00000566942 3481 ntBASIC2.93□□□□□ -1.94
RCCD1A6NED2 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
RCCD1A6NED2 MIR26A1-201ENST00000362205 77 ntBASIC2.92□□□□□ -1.94
RCCD1A6NED2 MIRLET7A1-201ENST00000362295 80 ntBASIC2.92□□□□□ -1.94
RCCD1A6NED2 SNORA72.6-201ENST00000384520 129 ntBASIC2.92□□□□□ -1.94
RCCD1A6NED2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RCCD1A6NED2 RNA5SP450-201ENST00000411206 102 ntBASIC2.92□□□□□ -1.94
RCCD1A6NED2 Y_RNA.660-201ENST00000516002 120 ntBASIC2.92□□□□□ -1.94
RCCD1A6NED2 SNORA4-201ENST00000584302 138 ntBASIC2.92□□□□□ -1.94
RCCD1A6NED2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RCCD1A6NED2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RCCD1A6NED2 Y_RNA.119-201ENST00000363301 96 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 RNU6-590P-201ENST00000365039 107 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 SNORA25.9-201ENST00000365087 128 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 MIR563-201ENST00000385080 79 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.91□□□□□ -1.94
RCCD1A6NED2 S100A11P2-201ENST00000467589 312 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.91□□□□□ -1.94
RCCD1A6NED2 AL096861.1-201ENST00000610899 123 ntBASIC2.91□□□□□ -1.94
RCCD1A6NED2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RCCD1A6NED2 AC131280.1-202ENST00000624067 4211 ntBASIC2.9□□□□□ -1.95
RCCD1A6NED2 RNU6-811P-201ENST00000384069 107 ntBASIC2.9□□□□□ -1.95
RCCD1A6NED2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RCCD1A6NED2 BX276092.1-201ENST00000427368 251 ntBASIC2.9□□□□□ -1.95
RCCD1A6NED2 RNU6-523P-201ENST00000516304 54 ntBASIC2.9□□□□□ -1.95
RCCD1A6NED2 MIR4536-1-201ENST00000583537 88 ntBASIC2.9□□□□□ -1.95
RCCD1A6NED2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
RCCD1A6NED2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms