Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL17A1Q9UMD9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL17A1Q9UMD9 Y_RNA.57-201ENST00000362806 113 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 HMGN1P7-201ENST00000491722 313 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 SNORD36C-201ENST00000516733 66 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 AC004812.1-201ENST00000540773 146 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 AC140658.3-201ENST00000567603 271 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 MIR4255-201ENST00000579351 72 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 MIR3134-201ENST00000579433 74 ntBASIC3.03□□□□□ -1.93
COL17A1Q9UMD9 RNU6-315P-201ENST00000362666 107 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.205-201ENST00000364128 113 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.351-201ENST00000365436 96 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.386-201ENST00000383913 105 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 AC016909.1-201ENST00000415916 166 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 MIR3616-201ENST00000584070 92 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 MIR376B-201ENST00000614515 100 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 AL512310.12-203ENST00000640543 90 ntBASIC3.02□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.440-201ENST00000384120 114 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 MIR519C-201ENST00000385053 87 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 MIR548O-201ENST00000408583 114 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 HMGN2P34-201ENST00000437647 269 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 RNU6-856P-201ENST00000516959 98 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 MIR4439-201ENST00000583746 80 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 AC002984.1-201ENST00000591692 448 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 AC096720.1-201ENST00000604441 183 ntBASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL17A1Q9UMD9 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3□□□□□ -1.93
COL17A1Q9UMD9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.37-201ENST00000362606 108 ntBASIC3□□□□□ -1.93
COL17A1Q9UMD9 RNU6-478P-201ENST00000363904 110 ntBASIC3□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.253-201ENST00000364562 112 ntBASIC3□□□□□ -1.93
COL17A1Q9UMD9 RNA5SP181-201ENST00000410246 98 ntBASIC3□□□□□ -1.93
COL17A1Q9UMD9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3□□□□□ -1.93
COL17A1Q9UMD9 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
COL17A1Q9UMD9 AC091932.4-201ENST00000623386 200 ntBASIC3□□□□□ -1.93
COL17A1Q9UMD9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3□□□□□ -1.93
COL17A1Q9UMD9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
COL17A1Q9UMD9 ZNF271P-202ENST00000465539 1970 ntBASIC2.99□□□□□ -1.93
COL17A1Q9UMD9 RNU6-1094P-201ENST00000362416 104 ntBASIC2.99□□□□□ -1.93
COL17A1Q9UMD9 RNU6-250P-201ENST00000516958 103 ntBASIC2.99□□□□□ -1.93
COL17A1Q9UMD9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.99□□□□□ -1.93
COL17A1Q9UMD9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.99□□□□□ -1.93
COL17A1Q9UMD9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 MIR342-201ENST00000362212 99 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 RNU6-129P-201ENST00000391022 107 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 RNA5SP144-201ENST00000410846 116 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 AL445685.2-201ENST00000422551 342 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 RPL31P63-201ENST00000422565 375 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 SCARNA18B-201ENST00000458806 135 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 RNU7-25P-201ENST00000516544 62 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 MIR4778-201ENST00000577635 80 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 MIR5002-201ENST00000584713 97 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 AC084768.2-201ENST00000622736 221 ntBASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL17A1Q9UMD9 SNORD114-26-201ENST00000363543 72 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 SNORD115-28-201ENST00000363931 81 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 Y_RNA.247-201ENST00000364500 92 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 RNU6-141P-201ENST00000410499 105 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 RN7SKP200-201ENST00000410564 320 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 AC233266.1-201ENST00000454518 96 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 SNORA25.15-201ENST00000516487 89 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 SNORA18.7-201ENST00000516910 131 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 AC242852.1-201ENST00000612151 96 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 AC244015.1-201ENST00000622301 99 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.97□□□□□ -1.93
COL17A1Q9UMD9 RNU1-23P-201ENST00000363361 144 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 RNU6-1163P-201ENST00000364516 107 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 AC090844.1-201ENST00000422019 156 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 SNX2P2-201ENST00000424553 323 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 AC069257.2-201ENST00000441819 155 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 RNU6-917P-201ENST00000516294 104 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 RNU6-1015P-201ENST00000517121 99 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 MIR5089-201ENST00000580047 84 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 MIR8081-201ENST00000611533 95 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 AL353746.1-201ENST00000566293 6881 ntBASIC2.96□□□□□ -1.93
COL17A1Q9UMD9 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 RNU4-32P-201ENST00000363404 141 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 SNORD115-37-201ENST00000363768 82 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 Y_RNA.547-201ENST00000384654 119 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 SNORA67.5-201ENST00000391036 107 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 AL022718.1-201ENST00000412004 84 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 AL161932.1-201ENST00000437408 146 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 AL450471.1-201ENST00000447509 127 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 RNU7-80P-201ENST00000459562 61 ntBASIC2.96□□□□□ -1.94
COL17A1Q9UMD9 RNU6-871P-201ENST00000516122 100 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms