Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 MIR2115-201ENST00000516657 100 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 RNU6-388P-201ENST00000517012 105 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 RNU6-389P-201ENST00000517048 105 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 MIR378D2-201ENST00000580636 98 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 Z83818.1-201ENST00000603584 150 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
HCN3Q9P1Z3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 RNU6-918P-201ENST00000391219 106 ntBASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 AC006461.1-201ENST00000412637 326 ntBASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 AL035398.1-201ENST00000430869 322 ntBASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 RNU7-53P-201ENST00000516705 60 ntBASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 U6.106-201ENST00000636360 105 ntBASIC1.1□□□□□ -2.23
HCN3Q9P1Z3 MIR96-201ENST00000362288 78 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 RNU6-275P-201ENST00000364910 107 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.412-201ENST00000384001 104 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 RNU6-643P-201ENST00000384018 107 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 SNORA24-201ENST00000384096 131 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 SNORA2B-201ENST00000384583 137 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 Y_RNA.552-201ENST00000384665 112 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 MIR942-201ENST00000401111 86 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 AC131055.1-201ENST00000584626 316 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 AC141273.2-201ENST00000618989 130 ntBASIC1.09□□□□□ -2.23
HCN3Q9P1Z3 MIR302B-201ENST00000362188 73 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.297-201ENST00000364950 91 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 RNU6-342P-201ENST00000384521 104 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 SEPT7P4-201ENST00000437076 306 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 RNU2-11P-201ENST00000459191 187 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 RNU7-96P-201ENST00000459535 64 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.08□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.36-201ENST00000362602 112 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 RNU1-93P-201ENST00000364704 169 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 MT-TG-201ENST00000387429 68 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 RNU6-913P-201ENST00000390913 95 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 AC022559.1-201ENST00000520905 205 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 AP000753.3-201ENST00000604083 169 ntBASIC1.07□□□□□ -2.24
HCN3Q9P1Z3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.75-201ENST00000362927 97 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 SNORD114-24-201ENST00000365029 72 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 MIR598-201ENST00000384868 97 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 RNU6-994P-201ENST00000410507 111 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 RNU7-73P-201ENST00000458743 63 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 RNU6-94P-201ENST00000607728 107 ntBASIC1.06□□□□□ -2.24
HCN3Q9P1Z3 SNORD113.3-201ENST00000364630 78 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 RNU6-205P-201ENST00000390858 107 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 RNU6-613P-201ENST00000410412 108 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.793-201ENST00000411222 111 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 AC090844.1-201ENST00000422019 156 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 HMGN1P33-201ENST00000432945 451 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 RNU6-998P-201ENST00000515894 101 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.674-201ENST00000516362 113 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 AC036111.3-201ENST00000526389 112 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 MRPS18CP4-201ENST00000535821 231 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 AL365205.2-201ENST00000594586 68 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 MIR376A2-201ENST00000636782 80 ntBASIC1.05□□□□□ -2.24
HCN3Q9P1Z3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 RNU6-978P-201ENST00000364371 103 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.233-201ENST00000364407 101 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 RNU6-125P-201ENST00000384505 107 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 SNORD111-201ENST00000408139 94 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 MIR548I3-201ENST00000408378 149 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 RNU7-70P-201ENST00000516941 66 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 MIR5197-201ENST00000583721 112 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 AC106800.4-201ENST00000614905 153 ntBASIC1.04□□□□□ -2.24
HCN3Q9P1Z3 SNORD114-27-201ENST00000363766 70 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 SNORA25.7-201ENST00000364375 127 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 SNORA1.1-201ENST00000364671 133 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 Y_RNA.435-201ENST00000384095 112 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 SNORD38B-201ENST00000384690 67 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 FABP5P4-201ENST00000437203 171 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 AC067940.1-201ENST00000458411 300 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 RNU7-80P-201ENST00000459562 61 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 RNU6-1219P-201ENST00000516143 112 ntBASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.03□□□□□ -2.24
HCN3Q9P1Z3 MIR4431-201ENST00000579990 94 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms