Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SNORA1.1-201ENST00000364671 133 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 RNA5SP259-201ENST00000365541 109 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 SNORD77B-201ENST00000391112 67 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 SNORA26.6-201ENST00000391256 115 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 AL451046.2-201ENST00000403074 277 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 RPS3AP1-201ENST00000413190 320 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 RNA5SP33-201ENST00000516687 98 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 MIR4287-201ENST00000579398 78 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
CXXC1Q9P0U4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CXXC1Q9P0U4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CXXC1Q9P0U4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.57□□□□□ -2
CXXC1Q9P0U4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CXXC1Q9P0U4 SNORD115-2-201ENST00000362842 82 ntBASIC2.57□□□□□ -2
CXXC1Q9P0U4 SNORD115-20-201ENST00000365099 82 ntBASIC2.57□□□□□ -2
CXXC1Q9P0U4 SNORA26.9-201ENST00000391322 122 ntBASIC2.57□□□□□ -2
CXXC1Q9P0U4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.57□□□□□ -2
CXXC1Q9P0U4 AC244636.1-201ENST00000421152 228 ntBASIC2.57□□□□□ -2
CXXC1Q9P0U4 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
CXXC1Q9P0U4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CXXC1Q9P0U4 RNU6-816P-201ENST00000390914 107 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 RNU6-1190P-201ENST00000410811 104 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 RNU6-295P-201ENST00000516901 104 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 AL773524.1-201ENST00000614065 229 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
CXXC1Q9P0U4 AC016717.2-201ENST00000609089 5141 ntBASIC2.56□□□□□ -2
CXXC1Q9P0U4 SNORD115-19-201ENST00000363098 82 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 SNORD115-18-201ENST00000363293 82 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 SNORD115-17-201ENST00000364612 82 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 SNORA6-201ENST00000384033 151 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 MIR653-201ENST00000385279 96 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 AL513534.2-201ENST00000603836 250 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 AC087741.2-201ENST00000619415 172 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 AC095038.3-201ENST00000634439 195 ntBASIC2.55□□□□□ -2
CXXC1Q9P0U4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.54□□□□□ -2
CXXC1Q9P0U4 SNORA67.3-201ENST00000384366 140 ntBASIC2.54□□□□□ -2
CXXC1Q9P0U4 MIR489-201ENST00000384923 84 ntBASIC2.54□□□□□ -2
CXXC1Q9P0U4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.54□□□□□ -2
CXXC1Q9P0U4 AL161935.2-201ENST00000414627 60 ntBASIC2.54□□□□□ -2
CXXC1Q9P0U4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.54□□□□□ -2
CXXC1Q9P0U4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.54□□□□□ -2
CXXC1Q9P0U4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CXXC1Q9P0U4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CXXC1Q9P0U4 MIR337-201ENST00000362281 93 ntBASIC2.53□□□□□ -2
CXXC1Q9P0U4 RNU1-17P-201ENST00000363022 152 ntBASIC2.53□□□□□ -2
CXXC1Q9P0U4 MIR499A-201ENST00000384903 122 ntBASIC2.53□□□□□ -2
CXXC1Q9P0U4 SNORD88.1-201ENST00000408684 91 ntBASIC2.53□□□□□ -2
CXXC1Q9P0U4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.53□□□□□ -2
CXXC1Q9P0U4 AC141557.1-201ENST00000540982 400 ntBASIC2.53□□□□□ -2
CXXC1Q9P0U4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.53□□□□□ -2
CXXC1Q9P0U4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CXXC1Q9P0U4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 SNORA16B-201ENST00000364674 135 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 RNU6-439P-201ENST00000384188 106 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 U8.13-201ENST00000390842 128 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 HMGN1P33-201ENST00000432945 451 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 RNU6-826P-201ENST00000516827 104 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 CYP3A52P-201ENST00000563326 91 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 MIR3618-201ENST00000580330 88 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 MIR4713-201ENST00000582691 75 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 MIR548AE2-201ENST00000583456 67 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 FAM71BP1-201ENST00000604431 523 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 MIR4251-201ENST00000635819 61 ntBASIC2.52□□□□□ -2.01
CXXC1Q9P0U4 RNU6-1255P-201ENST00000363434 112 ntBASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 SNORD111.1-201ENST00000516421 86 ntBASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 snoU13.31-201ENST00000607291 104 ntBASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 MIR8055-201ENST00000610739 97 ntBASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXXC1Q9P0U4 RNU4-36P-201ENST00000364294 144 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 AC022254.1-201ENST00000567857 235 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 AL357312.1-201ENST00000603879 298 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 AP001318.4-201ENST00000616637 121 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 MIR6733-201ENST00000635723 61 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 Z97988.1-201ENST00000637697 135 ntBASIC2.5□□□□□ -2.01
CXXC1Q9P0U4 RNU4-67P-201ENST00000364569 141 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 RNU6-409P-201ENST00000384114 104 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 MIR518E-201ENST00000385252 88 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 SNORA40.13-201ENST00000516379 120 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 MIR8074-201ENST00000615081 81 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 MIR219B-201ENST00000637023 88 ntBASIC2.49□□□□□ -2.01
CXXC1Q9P0U4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms