Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 RNU7-45P-201ENST00000459460 63 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 SNORA25.12-201ENST00000516202 82 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 RNU6-1338P-201ENST00000516328 91 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 SCARNA24.2-201ENST00000516968 130 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 RNU6-1137P-201ENST00000517073 99 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 MIR4680-201ENST00000580906 66 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 SNORA25.18-201ENST00000607153 114 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 AC134503.1-201ENST00000633048 54 ntBASIC0.22□□□□□ -2.37
KCNIP1Q9NZI2 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.128-201ENST00000363391 112 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 RNU1-133P-201ENST00000364867 167 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-597P-201ENST00000365620 102 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-1189P-201ENST00000383958 107 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 SNORA1-201ENST00000384107 130 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 MT-TF-201ENST00000387314 71 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 SNRPGP12-201ENST00000449481 213 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 SNRPGP8-201ENST00000454064 226 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-1299P-201ENST00000516316 100 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-126P-201ENST00000516685 103 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 MIR3678-201ENST00000578455 94 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 AC097639.2-201ENST00000603159 172 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 AP001282.2-201ENST00000616149 309 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 MIR6717-201ENST00000622747 73 ntBASIC0.21□□□□□ -2.38
KCNIP1Q9NZI2 MIR342-201ENST00000362212 99 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 SNORD118-201ENST00000363593 134 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 snoU2_19.4-201ENST00000364329 80 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-740P-201ENST00000364734 105 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.304-201ENST00000365011 112 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 MIR548P-201ENST00000408336 84 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-651P-201ENST00000411040 105 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 RNA5SP220-201ENST00000516298 104 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 MIR8066-201ENST00000617280 78 ntBASIC0.2□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 SNORA8.2-201ENST00000384372 139 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-1228P-201ENST00000391014 107 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-1203P-201ENST00000410703 110 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 RNU2-70P-201ENST00000410718 179 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 RNU2-55P-201ENST00000411146 174 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AL117351.2-201ENST00000513571 157 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-453P-201ENST00000516819 85 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-448P-201ENST00000517052 107 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AC020661.2-201ENST00000560114 134 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 MIR3171-201ENST00000584270 74 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.19□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 SNORA36.1-201ENST00000363424 132 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.432-201ENST00000384087 111 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.460-201ENST00000384255 102 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 RNA5SP153-201ENST00000516498 76 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 AC133485.4-201ENST00000561835 220 ntBASIC0.18□□□□□ -2.38
KCNIP1Q9NZI2 RNU5E-4P-201ENST00000364931 120 ntBASIC0.17□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.535-201ENST00000384612 99 ntBASIC0.17□□□□□ -2.38
KCNIP1Q9NZI2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.17□□□□□ -2.38
KCNIP1Q9NZI2 SNORD2.1-201ENST00000458762 69 ntBASIC0.17□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-1143P-201ENST00000516125 104 ntBASIC0.17□□□□□ -2.38
KCNIP1Q9NZI2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.17□□□□□ -2.38
KCNIP1Q9NZI2 RNA5SP117-201ENST00000365294 118 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 RNY3P5-201ENST00000384127 102 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 SNORA26-201ENST00000391286 122 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 AL606845.1-201ENST00000404881 255 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 SNORD71-201ENST00000411292 86 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 RNU6-570P-201ENST00000517051 105 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 AL662814.1-201ENST00000617364 121 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 MIR6734-201ENST00000621166 68 ntBASIC0.16□□□□□ -2.38
KCNIP1Q9NZI2 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 MIR644A-201ENST00000385262 94 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 SNORD93-201ENST00000408813 74 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 RNU4-83P-201ENST00000410863 133 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 AC096949.1-201ENST00000412047 152 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 MTND4LP11-201ENST00000422184 280 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 RNU6-1132P-201ENST00000459214 107 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 RNU6-561P-201ENST00000516222 102 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 AL589743.1-201ENST00000551932 2712 ntBASIC0.15□□□□□ -2.39
KCNIP1Q9NZI2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms