Protein–RNA interactions for Protein: Q9NY35

CLDND1, Claudin domain-containing protein 1, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1Q9NY35 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
CLDND1Q9NY35 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 Y_RNA.116-201ENST00000363292 103 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 RNU6-414P-201ENST00000363705 104 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 SNORA22-201ENST00000383907 134 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLDND1Q9NY35 AC003989.2-201ENST00000440224 169 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.07□□□□□ -2.08
CLDND1Q9NY35 RNU7-67P-201ENST00000459003 62 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 RNU2-35P-201ENST00000516446 142 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 SNORA31.11-201ENST00000516528 139 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 RNU6-958P-201ENST00000516995 106 ntBASIC2.07□□□□□ -2.08
CLDND1Q9NY35 RNU6-661P-201ENST00000362409 107 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 RNA5SP144-201ENST00000410846 116 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 RPL23AP6-201ENST00000446637 472 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 RNU7-53P-201ENST00000516705 60 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 AC007012.1-201ENST00000567192 175 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 MIR4791-201ENST00000607666 84 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 AC243994.1-201ENST00000618627 109 ntBASIC2.06□□□□□ -2.08
CLDND1Q9NY35 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.06□□□□□ -2.08
CLDND1Q9NY35 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CLDND1Q9NY35 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.05□□□□□ -2.08
CLDND1Q9NY35 Y_RNA.213-201ENST00000364178 111 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 Y_RNA.537-201ENST00000384626 109 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 RNU6-1104P-201ENST00000384723 104 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 MIR653-201ENST00000385279 96 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 MT-TI-201ENST00000387365 69 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 RNU4-62P-201ENST00000410125 130 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 RNU7-73P-201ENST00000458743 63 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 RNU7-45P-201ENST00000459460 63 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
CLDND1Q9NY35 Y_RNA.281-201ENST00000364774 94 ntBASIC2.04□□□□□ -2.08
CLDND1Q9NY35 RNU7-43P-201ENST00000516554 64 ntBASIC2.04□□□□□ -2.08
CLDND1Q9NY35 AC022523.2-201ENST00000561045 150 ntBASIC2.04□□□□□ -2.08
CLDND1Q9NY35 MIR4287-201ENST00000579398 78 ntBASIC2.04□□□□□ -2.08
CLDND1Q9NY35 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
CLDND1Q9NY35 RNU6-1067P-201ENST00000384752 107 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 MIR513A1-201ENST00000385138 129 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 RNU6-1319P-201ENST00000390855 104 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 RNU6-747P-201ENST00000390928 104 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 RNU6-241P-201ENST00000391148 104 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 RNU6-177P-201ENST00000411257 104 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 AP1B1P2-201ENST00000416196 106 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 POLR2J4-204ENST00000418424 324 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDND1Q9NY35 MIR4679-2-201ENST00000578358 77 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 MIR4764-201ENST00000580680 88 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 MIR8081-201ENST00000611533 95 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 AC084768.2-201ENST00000622736 221 ntBASIC2.03□□□□□ -2.08
CLDND1Q9NY35 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDND1Q9NY35 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CLDND1Q9NY35 RNA5SP259-201ENST00000365541 109 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 MIR759-201ENST00000390224 91 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 RNU6-913P-201ENST00000390913 95 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 SNORA26.6-201ENST00000391256 115 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 SNORA77B-201ENST00000578179 125 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
CLDND1Q9NY35 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CLDND1Q9NY35 RNY4P6-201ENST00000363667 96 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 SNORA51.10-201ENST00000384418 136 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 Y_RNA.549-201ENST00000384657 102 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 SNORD12C-201ENST00000386307 89 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 RNU6-1190P-201ENST00000410811 104 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 AL022718.1-201ENST00000412004 84 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 AL512326.2-201ENST00000426359 151 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 RNU6-322P-201ENST00000516010 103 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 RNU6-412P-201ENST00000516434 106 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 DNAJC19P9-201ENST00000555084 351 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 MIR3152-201ENST00000579801 74 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 AL020996.3-201ENST00000606617 222 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 AL035470.1-201ENST00000622571 220 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 AC008133.2-201ENST00000624540 351 ntBASIC2.01□□□□□ -2.09
CLDND1Q9NY35 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDND1Q9NY35 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDND1Q9NY35 Y_RNA.85-201ENST00000363014 111 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 MIR520C-201ENST00000385005 87 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDND1Q9NY35 RNA5SP261-201ENST00000410536 106 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2□□□□□ -2.09
CLDND1Q9NY35 RNA5SP82-201ENST00000516707 92 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 AC004812.1-201ENST00000540773 146 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 AC015688.6-201ENST00000577737 104 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 MIR6717-201ENST00000622747 73 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 MIR6841-201ENST00000637129 72 ntBASIC2□□□□□ -2.09
CLDND1Q9NY35 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.99□□□□□ -2.09
CLDND1Q9NY35 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
CLDND1Q9NY35 Y_RNA.224-201ENST00000364308 111 ntBASIC1.99□□□□□ -2.09
CLDND1Q9NY35 Y_RNA.362-201ENST00000365518 110 ntBASIC1.99□□□□□ -2.09
CLDND1Q9NY35 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
CLDND1Q9NY35 AL451046.2-201ENST00000403074 277 ntBASIC1.99□□□□□ -2.09
CLDND1Q9NY35 RNU6-893P-201ENST00000458841 100 ntBASIC1.99□□□□□ -2.09
CLDND1Q9NY35 snoU13.16-201ENST00000459350 104 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 357.8 ms