Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
RBM28Q9NW13 SNORD24-201ENST00000383884 75 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 MIR573-201ENST00000384964 99 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 RNU6-1228P-201ENST00000391014 107 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.48□□□□□ -2.33
RBM28Q9NW13 MTATP8P1-201ENST00000467115 207 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 RPS29P24-201ENST00000486345 171 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 RNU6-1143P-201ENST00000516125 104 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 RNU6-977P-201ENST00000516411 103 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 RNU6-126P-201ENST00000516685 103 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 MIR5688-201ENST00000580619 83 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 MIR4676-201ENST00000583078 72 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 MIR376A2-201ENST00000636782 80 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 Z97988.1-201ENST00000637697 135 ntBASIC0.48□□□□□ -2.33
RBM28Q9NW13 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
RBM28Q9NW13 RNU6-1309P-201ENST00000363305 108 ntBASIC0.47□□□□□ -2.33
RBM28Q9NW13 SNORA63C-201ENST00000364578 129 ntBASIC0.47□□□□□ -2.33
RBM28Q9NW13 SNRPGP8-201ENST00000454064 226 ntBASIC0.47□□□□□ -2.33
RBM28Q9NW13 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
RBM28Q9NW13 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.47□□□□□ -2.33
RBM28Q9NW13 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.47□□□□□ -2.33
RBM28Q9NW13 Y_RNA.44-201ENST00000362676 108 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 Y_RNA.634-201ENST00000364811 113 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 RNU4-45P-201ENST00000365469 141 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 SNORA1-201ENST00000384107 130 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 MIR588-201ENST00000384900 83 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 RNU6-1109P-201ENST00000391187 107 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 RNU6-602P-201ENST00000411155 105 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.46□□□□□ -2.34
RBM28Q9NW13 TRBVB-201ENST00000477100 408 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.46□□□□□ -2.34
RBM28Q9NW13 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
RBM28Q9NW13 RNU6-639P-201ENST00000384074 107 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 SNORD38B-201ENST00000384690 67 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 RNU6-1237P-201ENST00000384777 107 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 SNORD12C-201ENST00000386307 89 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 MT-TW-201ENST00000387382 68 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 RNU7-56P-201ENST00000458744 62 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 SNORD2.1-201ENST00000458762 69 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 RNU2-11P-201ENST00000459191 187 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 RNU7-45P-201ENST00000459460 63 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 RNU6-561P-201ENST00000516222 102 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 RNU6-504P-201ENST00000516568 104 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 MIR3612-201ENST00000579753 87 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 SNORD38B-202ENST00000625943 69 ntBASIC0.45□□□□□ -2.34
RBM28Q9NW13 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.44□□□□□ -2.34
RBM28Q9NW13 MIR342-201ENST00000362212 99 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 MIR18A-201ENST00000362310 71 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 Y_RNA.7-201ENST00000362352 102 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 Y_RNA.23-201ENST00000362496 106 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 Y_RNA.304-201ENST00000365011 112 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
RBM28Q9NW13 Y_RNA.440-201ENST00000384120 114 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 Y_RNA.483-201ENST00000384380 101 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 MIR140-201ENST00000385282 100 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 RNU2-70P-201ENST00000410718 179 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.44□□□□□ -2.34
RBM28Q9NW13 RNU6-1299P-201ENST00000516316 100 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 RNU7-53P-201ENST00000516705 60 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 AL442663.2-201ENST00000554385 511 ntBASIC0.44□□□□□ -2.34
RBM28Q9NW13 RNU6-238P-201ENST00000363313 106 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 SNORA1.1-201ENST00000364671 133 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 SNORD77.3-201ENST00000391113 65 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 AL606845.1-201ENST00000404881 255 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 MIR548I3-201ENST00000408378 149 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 RNU6-1165P-201ENST00000410119 107 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.43□□□□□ -2.34
RBM28Q9NW13 RNU6-998P-201ENST00000515894 101 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 RNU6-635P-201ENST00000516651 102 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.43□□□□□ -2.34
RBM28Q9NW13 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 U2.14-201ENST00000615943 113 ntBASIC0.43□□□□□ -2.34
RBM28Q9NW13 RNU6-597P-201ENST00000365620 102 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 RNU6-1227P-201ENST00000383981 107 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 Y_RNA.432-201ENST00000384087 111 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 snoU13.2-201ENST00000459201 104 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 SNORA62.5-201ENST00000516634 120 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 MIR4643-201ENST00000577473 78 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 AC044792.1-201ENST00000593294 196 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 AL162730.1-201ENST00000605734 292 ntBASIC0.42□□□□□ -2.34
RBM28Q9NW13 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RBM28Q9NW13 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.82-201ENST00000363000 102 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.92-201ENST00000363043 102 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.235-201ENST00000364412 102 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.306-201ENST00000365015 102 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.312-201ENST00000365089 102 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.322-201ENST00000365151 102 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 RNU6-1189P-201ENST00000383958 107 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 Y_RNA.416-201ENST00000384014 113 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 SNORA26.6-201ENST00000391256 115 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.41□□□□□ -2.34
RBM28Q9NW13 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
RBM28Q9NW13 MIR18B-201ENST00000454574 71 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms