Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.73□□□□□ -2.13
VTA1Q9NP79 RNU7-67P-201ENST00000459003 62 ntBASIC1.73□□□□□ -2.13
VTA1Q9NP79 MIR7111-201ENST00000619751 72 ntBASIC1.73□□□□□ -2.13
VTA1Q9NP79 MIR302B-201ENST00000362188 73 ntBASIC1.72□□□□□ -2.13
VTA1Q9NP79 RNU1-133P-201ENST00000364867 167 ntBASIC1.72□□□□□ -2.13
VTA1Q9NP79 MIR3133-201ENST00000583157 78 ntBASIC1.72□□□□□ -2.13
VTA1Q9NP79 MIR4251-201ENST00000635819 61 ntBASIC1.72□□□□□ -2.13
VTA1Q9NP79 MTND5P32-201ENST00000560711 1802 ntBASIC1.72□□□□□ -2.13
VTA1Q9NP79 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 Y_RNA.568-201ENST00000384742 113 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 RNU6-1054P-201ENST00000411293 104 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 RPS27P16-201ENST00000425758 201 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 SNORA25.12-201ENST00000516202 82 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 AP001328.1-201ENST00000528550 176 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 AP001485.1-201ENST00000604799 199 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 MIR8070-201ENST00000616510 88 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 TUG1_4.1-201ENST00000619464 181 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 MIR376A2-201ENST00000636782 80 ntBASIC1.71□□□□□ -2.14
VTA1Q9NP79 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
VTA1Q9NP79 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 RNU6-1336P-201ENST00000383886 109 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 MIR1287-201ENST00000408492 90 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 RNU6-893P-201ENST00000458841 100 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 RNA5SP236-201ENST00000516169 116 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 Y_RNA.692-201ENST00000516627 105 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 RNU11-2P-201ENST00000516898 142 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 Y_RNA.757-201ENST00000578934 114 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 MIR3152-201ENST00000579801 74 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 AC010332.2-201ENST00000613083 1904 ntBASIC1.7□□□□□ -2.14
VTA1Q9NP79 RNU6-392P-201ENST00000364926 101 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 Y_RNA.327-201ENST00000365201 102 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 Y_RNA.494-201ENST00000384432 111 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 SNORA40-201ENST00000388090 126 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
VTA1Q9NP79 RN7SKP88-201ENST00000516847 250 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 RNU6-958P-201ENST00000516995 106 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 7SK.8-201ENST00000612110 250 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 7SK.11-201ENST00000615477 250 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 7SK.13-201ENST00000622040 250 ntBASIC1.69□□□□□ -2.14
VTA1Q9NP79 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 SUMO1P3-201ENST00000439961 304 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 RNU2-11P-201ENST00000459191 187 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 U7.2-201ENST00000607576 63 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 AL096861.1-201ENST00000610899 123 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 AC091932.4-201ENST00000623386 200 ntBASIC1.68□□□□□ -2.14
VTA1Q9NP79 Y_RNA.118-201ENST00000363300 101 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 RNU6-704P-201ENST00000364162 103 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 Y_RNA.420-201ENST00000384043 110 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.67□□□□□ -2.14
VTA1Q9NP79 AL354695.1-201ENST00000427935 228 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 RNU7-41P-201ENST00000515917 61 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 RNU6-947P-201ENST00000516264 106 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 Y_RNA.690-201ENST00000516603 95 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
VTA1Q9NP79 RNU6-915P-201ENST00000364943 103 ntBASIC1.66□□□□□ -2.14
VTA1Q9NP79 MIR539-201ENST00000365690 78 ntBASIC1.66□□□□□ -2.14
VTA1Q9NP79 MIR499A-201ENST00000384903 122 ntBASIC1.66□□□□□ -2.14
VTA1Q9NP79 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
VTA1Q9NP79 RNU6-346P-201ENST00000516288 111 ntBASIC1.66□□□□□ -2.14
VTA1Q9NP79 Y_RNA.354-201ENST00000365448 111 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNY1P6-201ENST00000384193 109 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNU6-1319P-201ENST00000390855 104 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNU6-747P-201ENST00000390928 104 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNU6-241P-201ENST00000391148 104 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 MIR1304-201ENST00000408243 91 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNU6-177P-201ENST00000411257 104 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 SNORA31.4-201ENST00000516049 129 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNU6-426P-201ENST00000516464 97 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 RNU6-165P-201ENST00000517170 99 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 MIR3192-201ENST00000584920 77 ntBASIC1.65□□□□□ -2.15
VTA1Q9NP79 AL596211.1-201ENST00000569873 2277 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 U8.1-201ENST00000362843 134 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 SNORA25.9-201ENST00000365087 128 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 SNORA20-201ENST00000384662 132 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 RNU6-460P-201ENST00000391158 108 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 TMSB4XP3-201ENST00000445144 114 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 RNU2-60P-201ENST00000517290 128 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 AP003716.2-201ENST00000528260 108 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 MIR8055-201ENST00000610739 97 ntBASIC1.64□□□□□ -2.15
VTA1Q9NP79 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 MIR342-201ENST00000362212 99 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 RNU6-774P-201ENST00000363238 107 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 Y_RNA.430-201ENST00000384081 110 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 MIR570-201ENST00000384917 97 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.63□□□□□ -2.15
VTA1Q9NP79 AC245047.7-201ENST00000440265 293 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.63□□□□□ -2.15
VTA1Q9NP79 MIR3121-201ENST00000579680 77 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 AL020996.3-201ENST00000606617 222 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
VTA1Q9NP79 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
VTA1Q9NP79 RNA5SP264-201ENST00000363115 107 ntBASIC1.62□□□□□ -2.15
VTA1Q9NP79 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.62□□□□□ -2.15
VTA1Q9NP79 CYP3A52P-201ENST00000563326 91 ntBASIC1.62□□□□□ -2.15
VTA1Q9NP79 PRELID3BP2-201ENST00000605362 201 ntBASIC1.62□□□□□ -2.15
VTA1Q9NP79 AL022345.2-201ENST00000606307 135 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms