Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 HMGN1P33-201ENST00000432945 451 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 SCARNA23-201ENST00000516060 130 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 MALAT1.1-201ENST00000618249 95 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 MIR6717-201ENST00000622747 73 ntBASIC1.99□□□□□ -2.09
SEC61A2Q9H9S3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-363P-201ENST00000362895 105 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.93-201ENST00000363066 109 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 SNORD115-19-201ENST00000363098 82 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 SNORD115-18-201ENST00000363293 82 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 SNORD115-17-201ENST00000364612 82 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 RNA5SP37-201ENST00000365420 130 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.360-201ENST00000365512 102 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 SNORA26.6-201ENST00000391256 115 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-795P-201ENST00000516323 103 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 RNA5SP481-201ENST00000516814 122 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 RNU6-844P-201ENST00000517175 102 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 FAM71BP1-201ENST00000604431 523 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 AL442128.1-201ENST00000615151 90 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 MIR2052-201ENST00000636055 55 ntBASIC1.98□□□□□ -2.09
SEC61A2Q9H9S3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 Y_RNA.342-201ENST00000365352 113 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 MIR577-201ENST00000385196 96 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 AC011753.1-201ENST00000451001 220 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 MIR1270-201ENST00000459320 83 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 RN7SL429P-201ENST00000479090 223 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 RN7SL489P-201ENST00000486185 223 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 RN7SL327P-201ENST00000488659 223 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 RNU2-13P-201ENST00000515909 113 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 RN7SL853P-201ENST00000617250 223 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
SEC61A2Q9H9S3 SNORA24-201ENST00000384096 131 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 SNORD77B-201ENST00000391112 67 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RNA5SP100-201ENST00000410903 110 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RNA5SP59-201ENST00000410922 110 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 AL353813.1-201ENST00000440700 253 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-893P-201ENST00000458841 100 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 RNU7-61P-201ENST00000515897 61 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 SNORA31.17-201ENST00000516953 127 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 MIR548Z-201ENST00000584743 97 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 AL020996.3-201ENST00000606617 222 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 MIR6841-201ENST00000637129 72 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
SEC61A2Q9H9S3 MIR424-201ENST00000362227 98 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-832P-201ENST00000363319 107 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-679P-201ENST00000391003 106 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.601-201ENST00000410500 113 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNU7-73P-201ENST00000458743 63 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-162P-201ENST00000516228 103 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNU7-193P-201ENST00000516723 65 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-158P-201ENST00000517104 100 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 AC062037.1-201ENST00000605302 128 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 MIR6840-201ENST00000611937 71 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 AC012531.4-201ENST00000616509 177 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 MIR6873-201ENST00000622788 63 ntBASIC1.95□□□□□ -2.1
SEC61A2Q9H9S3 SNORD115-2-201ENST00000362842 82 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 SNORD115-20-201ENST00000365099 82 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-203P-201ENST00000384038 104 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 RNA5SP261-201ENST00000410536 106 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-521P-201ENST00000516663 105 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 MIR4694-201ENST00000578534 80 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 AC245884.12-201ENST00000615364 59 ntBASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-644P-201ENST00000391155 98 ntBASIC1.93□□□□□ -2.1
SEC61A2Q9H9S3 RNU1-41P-201ENST00000516161 162 ntBASIC1.93□□□□□ -2.1
SEC61A2Q9H9S3 RNU1-48P-201ENST00000516400 162 ntBASIC1.93□□□□□ -2.1
SEC61A2Q9H9S3 SNORA74.3-201ENST00000517108 154 ntBASIC1.93□□□□□ -2.1
SEC61A2Q9H9S3 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
SEC61A2Q9H9S3 AC091304.10-201ENST00000641554 121 ntBASIC1.93□□□□□ -2.1
SEC61A2Q9H9S3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-170P-201ENST00000362832 104 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 SNORA1.1-201ENST00000364671 133 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-1134P-201ENST00000365156 101 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-342P-201ENST00000384521 104 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNU6-917P-201ENST00000516294 104 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 AC024614.2-201ENST00000577584 372 ntBASIC1.92□□□□□ -2.1
SEC61A2Q9H9S3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms