Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SNORA25.3-201ENST00000363205 127 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 RNU6-915P-201ENST00000364943 103 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 SNORD38B-201ENST00000384690 67 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 SNORA40-201ENST00000388090 126 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 RNU1-98P-201ENST00000458992 160 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 RNU7-90P-201ENST00000459216 62 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 RNU6-789P-201ENST00000517105 102 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 AP001328.1-201ENST00000528550 176 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 MIR4264-201ENST00000583520 66 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 SNORD38B-202ENST00000625943 69 ntBASIC1.66□□□□□ -2.14
PIF1Q9H611 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.65□□□□□ -2.15
PIF1Q9H611 MIR377-201ENST00000362145 69 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 RNU6-613P-201ENST00000410412 108 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 MTND4LP9-201ENST00000427694 174 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.65□□□□□ -2.15
PIF1Q9H611 Y_RNA.686-201ENST00000516548 134 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 MIR4255-201ENST00000579351 72 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 MIR8055-201ENST00000610739 97 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.65□□□□□ -2.15
PIF1Q9H611 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PIF1Q9H611 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PIF1Q9H611 RNA5SP327-201ENST00000362494 101 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 U8.13-201ENST00000390842 128 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 RNU6-1319P-201ENST00000390855 104 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 RNU6-747P-201ENST00000390928 104 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 Y_RNA.586-201ENST00000391146 98 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 RNU6-241P-201ENST00000391148 104 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 MIR1185-1-201ENST00000408598 86 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 RNU6-177P-201ENST00000411257 104 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 RPS3AP1-201ENST00000413190 320 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 snoU13.25-201ENST00000458945 104 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 RNU7-21P-201ENST00000459430 62 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 AP001340.1-201ENST00000624405 217 ntBASIC1.64□□□□□ -2.15
PIF1Q9H611 Y_RNA.430-201ENST00000384081 110 ntBASIC1.63□□□□□ -2.15
PIF1Q9H611 RNY1P6-201ENST00000384193 109 ntBASIC1.63□□□□□ -2.15
PIF1Q9H611 AC132825.6-201ENST00000638861 357 ntBASIC1.63□□□□□ -2.15
PIF1Q9H611 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 RNU6-913P-201ENST00000390913 95 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 SNORA26.9-201ENST00000391322 122 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 AL603914.1-201ENST00000401964 204 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 AC063976.4-201ENST00000421971 163 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 snoU13.26-201ENST00000459452 105 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 RNU5E-3P-201ENST00000515913 68 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 RNU6-406P-201ENST00000516470 107 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 Y_RNA.690-201ENST00000516603 95 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 RNU2-60P-201ENST00000517290 128 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 AC019288.1-201ENST00000557918 224 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 AC027335.2-201ENST00000624030 375 ntBASIC1.62□□□□□ -2.15
PIF1Q9H611 RNU6-508P-201ENST00000363231 103 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 MIR618-201ENST00000385287 98 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 SNORA40.18-201ENST00000391200 128 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 MIR1302-7-201ENST00000408841 72 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.61□□□□□ -2.15
PIF1Q9H611 RNU6-1211P-201ENST00000459179 105 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 RNA5SP236-201ENST00000516169 116 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 TUG1_4.1-201ENST00000619464 181 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 MIR6717-201ENST00000622747 73 ntBASIC1.61□□□□□ -2.15
PIF1Q9H611 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PIF1Q9H611 Y_RNA.692-201ENST00000516627 105 ntBASIC1.6□□□□□ -2.15
PIF1Q9H611 RNU6-971P-201ENST00000516920 106 ntBASIC1.6□□□□□ -2.15
PIF1Q9H611 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PIF1Q9H611 U7.2-201ENST00000607576 63 ntBASIC1.6□□□□□ -2.15
PIF1Q9H611 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.6□□□□□ -2.15
PIF1Q9H611 AC021613.1-201ENST00000623880 111 ntBASIC1.6□□□□□ -2.15
PIF1Q9H611 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
PIF1Q9H611 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.59□□□□□ -2.15
PIF1Q9H611 AL157777.2-201ENST00000258070 137 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 MIR26B-201ENST00000362251 77 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 RNU6-309P-201ENST00000364573 106 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 Y_RNA.294-201ENST00000364916 102 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 SNORA19-201ENST00000384737 128 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 MIR19B1-201ENST00000384829 87 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 SNORA75.2-201ENST00000391138 150 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 SNORA75.3-201ENST00000391231 150 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 SNORD111-201ENST00000408139 94 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 Y_RNA.757-201ENST00000578934 114 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 MIR8081-201ENST00000611533 95 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 MIR6516-201ENST00000630554 81 ntBASIC1.59□□□□□ -2.15
PIF1Q9H611 Y_RNA.330-201ENST00000365230 109 ntBASIC1.58□□□□□ -2.16
PIF1Q9H611 RNU6-81P-201ENST00000365608 104 ntBASIC1.58□□□□□ -2.16
PIF1Q9H611 MIR200A-201ENST00000384875 90 ntBASIC1.58□□□□□ -2.16
PIF1Q9H611 RNU7-40P-201ENST00000516397 64 ntBASIC1.58□□□□□ -2.16
PIF1Q9H611 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
PIF1Q9H611 Y_RNA.168-201ENST00000363740 102 ntBASIC1.57□□□□□ -2.16
PIF1Q9H611 RNU1-124P-201ENST00000363861 145 ntBASIC1.57□□□□□ -2.16
PIF1Q9H611 SNORD113.3-201ENST00000364630 78 ntBASIC1.57□□□□□ -2.16
PIF1Q9H611 Y_RNA.363-201ENST00000365529 113 ntBASIC1.57□□□□□ -2.16
PIF1Q9H611 MIR539-201ENST00000365690 78 ntBASIC1.57□□□□□ -2.16
PIF1Q9H611 RNU6-939P-201ENST00000384634 107 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 RNU6-959P-201ENST00000384671 107 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 MIR1261-201ENST00000408659 82 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 AL606753.1-201ENST00000427435 87 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 Y_RNA.651-201ENST00000459380 103 ntBASIC1.56□□□□□ -2.16
PIF1Q9H611 MIR3121-201ENST00000579680 77 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms