Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU2-13P-201ENST00000515909 113 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 RNU6-958P-201ENST00000516995 106 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 AC022523.2-201ENST00000561045 150 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 AC021613.1-201ENST00000623880 111 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
NDC1Q9BTX1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.85□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 RNU6-147P-201ENST00000383983 107 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 SNORD12C-201ENST00000386307 89 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 MIR759-201ENST00000390224 91 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NDC1Q9BTX1 AL161935.2-201ENST00000414627 60 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 RPS29P29-201ENST00000456396 171 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 RNU6-917P-201ENST00000516294 104 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 MIR8074-201ENST00000615081 81 ntBASIC1.84□□□□□ -2.11
NDC1Q9BTX1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NDC1Q9BTX1 AP000648.3-201ENST00000623539 4507 ntBASIC1.84□□□□□ -2.12
NDC1Q9BTX1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.85-201ENST00000363014 111 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 RNU6-1107P-201ENST00000364817 104 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 SNORA24-201ENST00000384096 131 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 SNORA70.7-201ENST00000384159 133 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 MIR513A1-201ENST00000385138 129 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 RNA5SP144-201ENST00000410846 116 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 RNU6-412P-201ENST00000516434 106 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 SNORA74.3-201ENST00000517108 154 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 MIR4791-201ENST00000607666 84 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 AC243994.1-201ENST00000618627 109 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 AL035470.1-201ENST00000622571 220 ntBASIC1.83□□□□□ -2.12
NDC1Q9BTX1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
NDC1Q9BTX1 AL596028.1-201ENST00000326971 197 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 RNY4P6-201ENST00000363667 96 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 RNA5SP259-201ENST00000365541 109 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 AL512326.2-201ENST00000426359 151 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 RNU7-53P-201ENST00000516705 60 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 MIR4679-2-201ENST00000578358 77 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 MIR3613-201ENST00000579844 87 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
NDC1Q9BTX1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
NDC1Q9BTX1 SNORA63.5-201ENST00000363548 123 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.362-201ENST00000365518 110 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNU6-1319P-201ENST00000390855 104 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNU6-747P-201ENST00000390928 104 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNU6-241P-201ENST00000391148 104 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNU6-177P-201ENST00000411257 104 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 POLR2J4-204ENST00000418424 324 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNA5SP233-201ENST00000459153 113 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 RNU6-322P-201ENST00000516010 103 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
NDC1Q9BTX1 SNRPGP19-201ENST00000603826 189 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 uc_338.28-201ENST00000612082 187 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.81□□□□□ -2.12
NDC1Q9BTX1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.81□□□□□ -2.12
NDC1Q9BTX1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NDC1Q9BTX1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
NDC1Q9BTX1 RNU6-913P-201ENST00000390913 95 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 RNU6-1190P-201ENST00000410811 104 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 AL022718.1-201ENST00000412004 84 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 RNU7-73P-201ENST00000458743 63 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 AC004812.1-201ENST00000540773 146 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 SNORA77B-201ENST00000578179 125 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.8□□□□□ -2.12
NDC1Q9BTX1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NDC1Q9BTX1 AL589743.1-201ENST00000551932 2712 ntBASIC1.8□□□□□ -2.12
NDC1Q9BTX1 MIR450A1-201ENST00000362262 91 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 RNU1-17P-201ENST00000363022 152 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 RNU6-106P-201ENST00000384405 107 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NDC1Q9BTX1 SNORA26.6-201ENST00000391256 115 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 AL356379.1-201ENST00000414105 126 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 RPS27P21-201ENST00000486977 252 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 MIR3152-201ENST00000579801 74 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 MIR3163-201ENST00000581592 73 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.79□□□□□ -2.12
NDC1Q9BTX1 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.171-201ENST00000363760 102 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.344-201ENST00000365381 112 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 Y_RNA.531-201ENST00000384589 121 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 MIR548D2-201ENST00000384955 97 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 MIR653-201ENST00000385279 96 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 RNU6-554P-201ENST00000410466 106 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
NDC1Q9BTX1 AL031737.1-201ENST00000450125 223 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms