Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
LRFN3Q9BTN0 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 AC003989.2-201ENST00000440224 169 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.677-201ENST00000516401 85 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 SNORD45.4-201ENST00000516629 73 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 SNORD36C-201ENST00000516733 66 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 AC021506.2-201ENST00000612354 169 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 AC106754.2-201ENST00000623006 233 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 AC027279.3-201ENST00000625055 122 ntBASIC2□□□□□ -2.09
LRFN3Q9BTN0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LRFN3Q9BTN0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 MIR424-201ENST00000362227 98 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 RNU6-349P-201ENST00000362402 107 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.354-201ENST00000365448 111 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 MIR30A-201ENST00000385092 71 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 RNU6-938P-201ENST00000411285 103 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 MIR3198-2-201ENST00000577868 80 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 AL035470.1-201ENST00000622571 220 ntBASIC1.99□□□□□ -2.09
LRFN3Q9BTN0 ZNF720P1-201ENST00000562403 1939 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.198-201ENST00000364013 98 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 RNU6-690P-201ENST00000365242 106 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 RNU6-424P-201ENST00000384367 105 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 HMGN2P32-201ENST00000444648 269 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 SNORA72.7-201ENST00000516349 94 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 RNY4P20-201ENST00000516678 93 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 RNU6-250P-201ENST00000516958 103 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 RNU6-537P-201ENST00000517277 103 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
LRFN3Q9BTN0 SNORA63.5-201ENST00000363548 123 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.163-201ENST00000363702 113 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.328-201ENST00000365208 113 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 Y_RNA.440-201ENST00000384120 114 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 RNU6-163P-201ENST00000384396 106 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 MIR598-201ENST00000384868 97 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 RNA5SP168-201ENST00000516642 112 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 AC021443.1-201ENST00000604478 211 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 AC103810.8-201ENST00000607347 118 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 AC005336.3-201ENST00000623833 2679 ntBASIC1.97□□□□□ -2.09
LRFN3Q9BTN0 RNU6-766P-201ENST00000362478 107 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.369-201ENST00000365568 117 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 RNU6-1014P-201ENST00000383940 103 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 RNU6-756P-201ENST00000383997 107 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 MIR660-201ENST00000385235 97 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 MT-TI-201ENST00000387365 69 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 RNY4P30-201ENST00000410216 95 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 AC099513.1-201ENST00000490423 301 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 RNU7-70P-201ENST00000516941 66 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 AP003484.1-201ENST00000530974 250 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 RNU6-94P-201ENST00000607728 107 ntBASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.96□□□□□ -2.1
LRFN3Q9BTN0 AL589743.1-201ENST00000551932 2712 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.49-201ENST00000362714 112 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNU6-833P-201ENST00000363486 107 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNY4P6-201ENST00000363667 96 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.323-201ENST00000365157 109 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.348-201ENST00000365403 103 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNY1P6-201ENST00000384193 109 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNU6-905P-201ENST00000384434 107 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 MIR1302-5-201ENST00000408164 150 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 AC009474.2-201ENST00000451383 136 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RPL39P34-201ENST00000477141 156 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 AC114811.1-201ENST00000507207 168 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNU7-12P-201ENST00000516030 62 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 RNU6-830P-201ENST00000516353 107 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 SUMO2P16-201ENST00000519475 264 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 AC015726.2-201ENST00000620112 122 ntBASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.95□□□□□ -2.1
LRFN3Q9BTN0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 SNORD33-201ENST00000362761 85 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.213-201ENST00000364178 111 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 RNU1-133P-201ENST00000364867 167 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.298-201ENST00000364960 107 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 SNORA51.5-201ENST00000384126 131 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 MIR194-1-201ENST00000384892 85 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 U8.16-201ENST00000391279 133 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 AC087499.4-201ENST00000448505 178 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 SNORA18.7-201ENST00000516910 131 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 RNU6-1116P-201ENST00000517269 99 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 AP001318.4-201ENST00000616637 121 ntBASIC1.94□□□□□ -2.1
LRFN3Q9BTN0 MIRLET7C-201ENST00000362160 84 ntBASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 RNU6-640P-201ENST00000363693 105 ntBASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 MIR9-3-201ENST00000385084 90 ntBASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 U8.17-201ENST00000391292 132 ntBASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 RNU7-164P-201ENST00000459221 62 ntBASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.93□□□□□ -2.1
LRFN3Q9BTN0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms