Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 Y_RNA.440-201ENST00000384120 114 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 MIR573-201ENST00000384964 99 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 SNORD77.3-201ENST00000391113 65 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 MIR18B-201ENST00000454574 71 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.67□□□□□ -2.3
SDF4Q9BRK5 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 MIR4804-201ENST00000581683 73 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.67□□□□□ -2.3
SDF4Q9BRK5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SDF4Q9BRK5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
SDF4Q9BRK5 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 RNU6-1160P-201ENST00000384546 104 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 MIR520F-201ENST00000384824 87 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 MT-TW-201ENST00000387382 68 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 Y_RNA.622-201ENST00000411091 108 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 RNU6-602P-201ENST00000411155 105 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 RNU6-177P-201ENST00000411257 104 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 RNU6-453P-201ENST00000516819 85 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.66□□□□□ -2.3
SDF4Q9BRK5 MIR6740-201ENST00000618268 113 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 AL365265.1-201ENST00000621045 234 ntBASIC0.66□□□□□ -2.3
SDF4Q9BRK5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
SDF4Q9BRK5 Y_RNA.326-201ENST00000365176 113 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 RNU6-381P-201ENST00000391259 108 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 MIR548I3-201ENST00000408378 149 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 RNA5SP222-201ENST00000411039 105 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 HMGN1P33-201ENST00000432945 451 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 RNU2-11P-201ENST00000459191 187 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 snoU13.2-201ENST00000459201 104 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.679-201ENST00000516416 91 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 RNU4-54P-201ENST00000516428 129 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 RNA5SP121-201ENST00000516537 101 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 MIR4676-201ENST00000583078 72 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 AC020891.4-201ENST00000605745 93 ntBASIC0.65□□□□□ -2.31
SDF4Q9BRK5 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.65□□□□□ -2.31
SDF4Q9BRK5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SDF4Q9BRK5 RNU6-238P-201ENST00000363313 106 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.461-201ENST00000384263 103 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.483-201ENST00000384380 101 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.574-201ENST00000384766 95 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 MIR548F4-201ENST00000408515 105 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
SDF4Q9BRK5 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 MTATP8P1-201ENST00000467115 207 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 AL442663.2-201ENST00000554385 511 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.64□□□□□ -2.31
SDF4Q9BRK5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.64□□□□□ -2.31
SDF4Q9BRK5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.199-201ENST00000364014 102 ntBASIC0.63□□□□□ -2.31
SDF4Q9BRK5 RNU4-45P-201ENST00000365469 141 ntBASIC0.63□□□□□ -2.31
SDF4Q9BRK5 RNU6-472P-201ENST00000384299 107 ntBASIC0.63□□□□□ -2.31
SDF4Q9BRK5 MIR588-201ENST00000384900 83 ntBASIC0.63□□□□□ -2.31
SDF4Q9BRK5 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
SDF4Q9BRK5 uc_338.6-201ENST00000613544 171 ntBASIC0.63□□□□□ -2.31
SDF4Q9BRK5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SDF4Q9BRK5 RNU6-653P-201ENST00000363074 106 ntBASIC0.62□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.352-201ENST00000365439 102 ntBASIC0.62□□□□□ -2.31
SDF4Q9BRK5 SNORA1-201ENST00000384107 130 ntBASIC0.62□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.542-201ENST00000384641 111 ntBASIC0.62□□□□□ -2.31
SDF4Q9BRK5 MIR563-201ENST00000385080 79 ntBASIC0.62□□□□□ -2.31
SDF4Q9BRK5 RNU6-1165P-201ENST00000410119 107 ntBASIC0.62□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.23-201ENST00000362496 106 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 RNU4-17P-201ENST00000365598 141 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 RNU6-945P-201ENST00000383947 107 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 MIR938-201ENST00000401216 83 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AC015818.7-201ENST00000428754 109 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AC087499.7-201ENST00000441958 109 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AL138752.1-201ENST00000452964 351 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AL157398.1-201ENST00000452981 186 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.61□□□□□ -2.31
SDF4Q9BRK5 Z83818.1-201ENST00000603584 150 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 AC010332.2-201ENST00000613083 1904 ntBASIC0.61□□□□□ -2.31
SDF4Q9BRK5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.7-201ENST00000362352 102 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.145-201ENST00000363527 102 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU6-103P-201ENST00000363686 107 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.176-201ENST00000363815 109 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNA5SP499-201ENST00000363982 119 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.262-201ENST00000364641 102 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU6-728P-201ENST00000365375 104 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.416-201ENST00000384014 113 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU6-342P-201ENST00000384521 104 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 MIR613-201ENST00000385248 95 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 MIR936-201ENST00000401264 98 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNA5SP261-201ENST00000410536 106 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU4-43P-201ENST00000410628 137 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.812-201ENST00000610788 101 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.784-201ENST00000613803 101 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.787-201ENST00000616522 101 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.780-201ENST00000617336 101 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 Y_RNA.801-201ENST00000619005 101 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
SDF4Q9BRK5 RNU6-1292P-201ENST00000383856 107 ntBASIC0.59□□□□□ -2.31
SDF4Q9BRK5 MIR140-201ENST00000385282 100 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms