Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 SNORD28B-201ENST00000390993 75 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 RNA5SP100-201ENST00000410903 110 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 RNA5SP59-201ENST00000410922 110 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 MIR4498-201ENST00000577599 66 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 AL096840.1-201ENST00000603287 93 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 SNORA28-201ENST00000606769 126 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 AL157834.3-201ENST00000615543 103 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 Y_RNA.410-201ENST00000383992 113 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 SNORD38C-201ENST00000384381 69 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 AC063976.4-201ENST00000421971 163 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 HMGN2P32-201ENST00000444648 269 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 RPS26P48-201ENST00000491713 339 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 RNY4P20-201ENST00000516678 93 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 SUMO2P16-201ENST00000519475 264 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 MIR4709-201ENST00000577272 72 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 AL773524.1-201ENST00000614065 229 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 AC106754.2-201ENST00000623006 233 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 AC091932.4-201ENST00000623386 200 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.55□□□□□ -2.16
MEIS3Q99687 AC095038.3-201ENST00000634439 195 ntBASIC1.55□□□□□ -2.16
MEIS3Q99687 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
MEIS3Q99687 RNU1-133P-201ENST00000364867 167 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 RNA5SP212-201ENST00000391223 107 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 U8.17-201ENST00000391292 132 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 RNU6-1190P-201ENST00000410811 104 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 RPL23AP6-201ENST00000446637 472 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 MIR4299-201ENST00000577899 72 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 AC021443.1-201ENST00000604478 211 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 U1.36-201ENST00000620684 176 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 AL035470.1-201ENST00000622571 220 ntBASIC1.54□□□□□ -2.16
MEIS3Q99687 MIR450A1-201ENST00000362262 91 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
MEIS3Q99687 AC244636.1-201ENST00000421152 228 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 AC069257.2-201ENST00000441819 155 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 PGBD4P5-201ENST00000445958 426 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 snoU13.27-201ENST00000459278 104 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 RNU6-830P-201ENST00000516353 107 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 RNU2-35P-201ENST00000516446 142 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 RNU7-70P-201ENST00000516941 66 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 AL513534.2-201ENST00000603836 250 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 uc_338.28-201ENST00000612082 187 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 AC027279.3-201ENST00000625055 122 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
MEIS3Q99687 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
MEIS3Q99687 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 Y_RNA.346-201ENST00000365385 112 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 RNU6-147P-201ENST00000383983 107 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 SNORA27-201ENST00000384323 126 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 MIR1267-201ENST00000408723 78 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.52□□□□□ -2.17
MEIS3Q99687 RNU7-123P-201ENST00000515911 60 ntBASIC1.52□□□□□ -2.17
MEIS3Q99687 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
MEIS3Q99687 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
MEIS3Q99687 Y_RNA.242-201ENST00000364473 110 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 RNY1P6-201ENST00000384193 109 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 RNU6-997P-201ENST00000384725 107 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 MIR660-201ENST00000385235 97 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
MEIS3Q99687 RNU2-11P-201ENST00000459191 187 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 RNU7-164P-201ENST00000459221 62 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 RNU6-958P-201ENST00000516995 106 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.51□□□□□ -2.17
MEIS3Q99687 AC007012.1-201ENST00000567192 175 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 MIR548AR-201ENST00000582191 57 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 AL359821.1-201ENST00000605519 182 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 AL442644.1-201ENST00000454390 3105 ntBASIC1.51□□□□□ -2.17
MEIS3Q99687 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
MEIS3Q99687 SNORA63.5-201ENST00000363548 123 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 Y_RNA.298-201ENST00000364960 107 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 MIR676-201ENST00000390702 67 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 AL512326.2-201ENST00000426359 151 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 AC087499.4-201ENST00000448505 178 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 MIR3613-201ENST00000579844 87 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
MEIS3Q99687 RNU6-414P-201ENST00000363705 104 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 Y_RNA.171-201ENST00000363760 102 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 Y_RNA.327-201ENST00000365201 102 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 RNU6-880P-201ENST00000384526 107 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 SNORD123-201ENST00000459473 70 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 RNU6-917P-201ENST00000516294 104 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 RNU6-113P-201ENST00000516653 101 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 RNU6-1258P-201ENST00000516911 111 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.49□□□□□ -2.17
MEIS3Q99687 MIR4305-201ENST00000583252 102 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
MEIS3Q99687 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
MEIS3Q99687 Y_RNA.116-201ENST00000363292 103 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 Y_RNA.370-201ENST00000365589 108 ntBASIC1.48□□□□□ -2.17
MEIS3Q99687 MIR452-201ENST00000385020 85 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms