Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 Y_RNA.76-201ENST00000362931 109 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 RNU4-17P-201ENST00000365598 141 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 MIR568-201ENST00000385036 95 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 SNORD58.1-201ENST00000391313 66 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 AL606845.1-201ENST00000404881 255 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 SNORD99-201ENST00000408612 74 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 MIR548H3-201ENST00000408771 118 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 Y_RNA.622-201ENST00000411091 108 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 AP003484.1-201ENST00000530974 250 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 AP000753.3-201ENST00000604083 169 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 AC134878.1-201ENST00000619901 243 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SNRNP40Q96DI7 Y_RNA.54-201ENST00000362766 105 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 RNU6-580P-201ENST00000365159 107 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 RNU6-1335P-201ENST00000365426 107 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 MIR936-201ENST00000401264 98 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 RNU7-73P-201ENST00000458743 63 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 RNU7-67P-201ENST00000459003 62 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 RNU6-1045P-201ENST00000516321 107 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 SNORD36C-201ENST00000516733 66 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 MIR1273G-201ENST00000577677 100 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
SNRNP40Q96DI7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.162-201ENST00000363683 102 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 SNORD45.3-201ENST00000363836 72 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.262-201ENST00000364641 102 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.292-201ENST00000364904 97 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.416-201ENST00000384014 113 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 SNORA27-201ENST00000384323 126 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 MIR508-201ENST00000384857 115 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 RNU4-43P-201ENST00000410628 137 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 RNU2-70P-201ENST00000410718 179 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 RNU6-958P-201ENST00000516995 106 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 RNU6-103P-201ENST00000363686 107 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 RNU6-125P-201ENST00000384505 107 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 RNU6-205P-201ENST00000390858 107 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 AC090844.1-201ENST00000422019 156 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 AF228730.3-201ENST00000436691 102 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 RPS29P24-201ENST00000486345 171 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 RNU6-351P-201ENST00000516097 100 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 MIR4264-201ENST00000583520 66 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
SNRNP40Q96DI7 RNY4P28-201ENST00000365281 93 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 RNU6-913P-201ENST00000390913 95 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 MIR1302-3-201ENST00000408128 138 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 AL138752.1-201ENST00000452964 351 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 MTND1P19-201ENST00000511780 315 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 RNU7-53P-201ENST00000516705 60 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 Z97988.1-201ENST00000637697 135 ntBASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
SNRNP40Q96DI7 MIR342-201ENST00000362212 99 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.20-201ENST00000362479 113 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.23-201ENST00000362496 106 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 SNORD114-23-201ENST00000363536 72 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.199-201ENST00000364014 102 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.440-201ENST00000384120 114 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 MIR1827-201ENST00000408549 66 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 AC015818.7-201ENST00000428754 109 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 AC087499.7-201ENST00000441958 109 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 RNU7-96P-201ENST00000459535 64 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 RNU6-998P-201ENST00000515894 101 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 RNU6-561P-201ENST00000516222 102 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 MIR8055-201ENST00000610739 97 ntBASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SNRNP40Q96DI7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 RNU6-728P-201ENST00000365375 104 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 RNU6-1189P-201ENST00000383958 107 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 SNORA1-201ENST00000384107 130 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.478-201ENST00000384358 107 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.539-201ENST00000384635 107 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 Y_RNA.542-201ENST00000384641 111 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 SNORD105-201ENST00000386910 85 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 SNORD77.3-201ENST00000391113 65 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 AC244023.1-201ENST00000426884 112 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 RNY3P16-201ENST00000516338 101 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
SNRNP40Q96DI7 AC242498.1-201ENST00000604134 111 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms