Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MIR3646-201ENST00000578301 84 ntBASIC2.13□□□□□ -2.07
ZNF428Q96B54 RNA5SP325-201ENST00000363756 130 ntBASIC2.12□□□□□ -2.07
ZNF428Q96B54 Y_RNA.291-201ENST00000364886 113 ntBASIC2.12□□□□□ -2.07
ZNF428Q96B54 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.12□□□□□ -2.07
ZNF428Q96B54 RNU6-970P-201ENST00000516312 107 ntBASIC2.12□□□□□ -2.07
ZNF428Q96B54 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.12□□□□□ -2.07
ZNF428Q96B54 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.11□□□□□ -2.07
ZNF428Q96B54 RNU6-235P-201ENST00000362644 107 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 Y_RNA.71-201ENST00000362892 104 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 RNU1-42P-201ENST00000364033 160 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 RNU6-1189P-201ENST00000383958 107 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 RNU6-22P-201ENST00000384355 107 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 MIR513C-201ENST00000401352 84 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 MIR1323-201ENST00000408090 73 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 AF228730.3-201ENST00000436691 102 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 RNU2-13P-201ENST00000515909 113 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 RNA5SP480-201ENST00000516840 109 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 AP003484.1-201ENST00000530974 250 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 MIR8070-201ENST00000616510 88 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 AC008133.2-201ENST00000624540 351 ntBASIC2.11□□□□□ -2.07
ZNF428Q96B54 Y_RNA.52-201ENST00000362760 96 ntBASIC2.1□□□□□ -2.07
ZNF428Q96B54 Y_RNA.224-201ENST00000364308 111 ntBASIC2.1□□□□□ -2.07
ZNF428Q96B54 RNU6-309P-201ENST00000364573 106 ntBASIC2.1□□□□□ -2.07
ZNF428Q96B54 SNORA24-201ENST00000384096 131 ntBASIC2.1□□□□□ -2.07
ZNF428Q96B54 SNORA75.5-201ENST00000391291 81 ntBASIC2.1□□□□□ -2.07
ZNF428Q96B54 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.1□□□□□ -2.07
ZNF428Q96B54 Y_RNA.454-201ENST00000384224 113 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 MIR624-201ENST00000385217 97 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 SNORA40-201ENST00000388090 126 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 SNORD12-201ENST00000391002 90 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 SNORD77.3-201ENST00000391113 65 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 RNU6-938P-201ENST00000411285 103 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.09□□□□□ -2.07
ZNF428Q96B54 RPS29P23-201ENST00000458635 123 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 Y_RNA.651-201ENST00000459380 103 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 RNU7-96P-201ENST00000459535 64 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 RNU7-53P-201ENST00000516705 60 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 MIR548AR-201ENST00000582191 57 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.09□□□□□ -2.07
ZNF428Q96B54 AL391516.1-201ENST00000554380 2449 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZNF428Q96B54 Y_RNA.494-201ENST00000384432 111 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 RNA5SP127-201ENST00000411051 133 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 AP1B1P2-201ENST00000416196 106 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 RNU7-80P-201ENST00000459562 61 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 SNORD36C-201ENST00000516733 66 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 IGKV1-22-201ENST00000524313 326 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 AC108081.1-201ENST00000604358 221 ntBASIC2.08□□□□□ -2.08
ZNF428Q96B54 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.08□□□□□ -2.08
ZNF428Q96B54 RNU6-1290P-201ENST00000362957 109 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 Y_RNA.241-201ENST00000364470 117 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 SNORA51.10-201ENST00000384418 136 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 RNU6-735P-201ENST00000410612 107 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 Y_RNA.630-201ENST00000411370 108 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 snoU13.16-201ENST00000459350 104 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 RNU6-165P-201ENST00000517170 99 ntBASIC2.07□□□□□ -2.08
ZNF428Q96B54 SNORD26-201ENST00000384147 75 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 SNORA27-201ENST00000384323 126 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 AC245047.7-201ENST00000440265 293 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 RPS29P29-201ENST00000456396 171 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 RNU6-1333P-201ENST00000516162 93 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 RNA5SP236-201ENST00000516169 116 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 CYP3A52P-201ENST00000563326 91 ntBASIC2.06□□□□□ -2.08
ZNF428Q96B54 Y_RNA.280-201ENST00000364765 112 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 RNU6-1168P-201ENST00000390831 104 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 SNORA67.5-201ENST00000391036 107 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 Y_RNA.584-201ENST00000391090 114 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 RNA5SP261-201ENST00000410536 106 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 SCARNA15-202ENST00000516881 127 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 AP001328.1-201ENST00000528550 176 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 MIR5197-201ENST00000583721 112 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 snoU13.31-201ENST00000607291 104 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 MIR4251-201ENST00000635819 61 ntBASIC2.05□□□□□ -2.08
ZNF428Q96B54 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.05□□□□□ -2.08
ZNF428Q96B54 RNU2-51P-201ENST00000410708 197 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 RNU7-73P-201ENST00000458743 63 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 RNU7-95P-201ENST00000459222 64 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 RPS29P24-201ENST00000486345 171 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.04□□□□□ -2.08
ZNF428Q96B54 HSPE1P19-201ENST00000603327 295 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 AC011603.4-201ENST00000611325 277 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 AC243994.1-201ENST00000618627 109 ntBASIC2.04□□□□□ -2.08
ZNF428Q96B54 RNU6-1117P-201ENST00000384525 104 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 RNU5E-3P-201ENST00000515913 68 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 RNU6-781P-201ENST00000516377 101 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 SNORA18.4-201ENST00000516440 124 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 RNU7-181P-201ENST00000517234 74 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 AC090821.2-201ENST00000523552 176 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 MIR3122-201ENST00000577243 73 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 AL096861.1-201ENST00000610899 123 ntBASIC2.03□□□□□ -2.08
ZNF428Q96B54 RNY1P10-201ENST00000363268 113 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 SNORD116-14-201ENST00000383894 92 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 SNORD116-17-201ENST00000383929 92 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 SNORD116-15-201ENST00000384445 92 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 SNORD116-19-201ENST00000384729 92 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 RNU6-1154P-201ENST00000391001 104 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 RPS26P48-201ENST00000491713 339 ntBASIC2.02□□□□□ -2.09
ZNF428Q96B54 RNU6-1149P-201ENST00000516810 97 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms