Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 U1.36-201ENST00000620684 176 ntBASIC3.09□□□□□ -1.91
HLA-CQ95604 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-CQ95604 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HLA-CQ95604 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HLA-CQ95604 Y_RNA.191-201ENST00000363972 113 ntBASIC3.08□□□□□ -1.92
HLA-CQ95604 RNU6-1307P-201ENST00000391012 103 ntBASIC3.08□□□□□ -1.92
HLA-CQ95604 snoU13.23-201ENST00000458863 104 ntBASIC3.08□□□□□ -1.92
HLA-CQ95604 RNU7-48P-201ENST00000458875 63 ntBASIC3.08□□□□□ -1.92
HLA-CQ95604 RNU7-137P-201ENST00000516788 62 ntBASIC3.08□□□□□ -1.92
HLA-CQ95604 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-CQ95604 AC005336.3-201ENST00000623833 2679 ntBASIC3.07□□□□□ -1.92
HLA-CQ95604 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-CQ95604 RNU6-859P-201ENST00000362728 107 ntBASIC3.07□□□□□ -1.92
HLA-CQ95604 AC234781.5-201ENST00000508429 271 ntBASIC3.07□□□□□ -1.92
HLA-CQ95604 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
HLA-CQ95604 AP001362.1-201ENST00000625165 124 ntBASIC3.07□□□□□ -1.92
HLA-CQ95604 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HLA-CQ95604 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-CQ95604 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-CQ95604 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HLA-CQ95604 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-CQ95604 RNA5SP68-201ENST00000363885 119 ntBASIC3.06□□□□□ -1.92
HLA-CQ95604 MIR519C-201ENST00000385053 87 ntBASIC3.06□□□□□ -1.92
HLA-CQ95604 RNU6-1321P-201ENST00000390905 107 ntBASIC3.06□□□□□ -1.92
HLA-CQ95604 HMGN2P39-201ENST00000398005 273 ntBASIC3.06□□□□□ -1.92
HLA-CQ95604 AC011753.1-201ENST00000451001 220 ntBASIC3.06□□□□□ -1.92
HLA-CQ95604 MIR6817-201ENST00000615588 66 ntBASIC3.06□□□□□ -1.92
HLA-CQ95604 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-CQ95604 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-CQ95604 RNU6-1123P-201ENST00000362347 106 ntBASIC3.05□□□□□ -1.92
HLA-CQ95604 SNORA9.2-201ENST00000365361 133 ntBASIC3.05□□□□□ -1.92
HLA-CQ95604 SPINT5P-201ENST00000448174 155 ntBASIC3.05□□□□□ -1.92
HLA-CQ95604 RPS27P29-201ENST00000463110 252 ntBASIC3.05□□□□□ -1.92
HLA-CQ95604 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.05□□□□□ -1.92
HLA-CQ95604 MIR4764-201ENST00000580680 88 ntBASIC3.05□□□□□ -1.92
HLA-CQ95604 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-CQ95604 ZNF658B-202ENST00000615961 3375 ntBASIC3.04□□□□□ -1.92
HLA-CQ95604 MIR9-1-201ENST00000385198 89 ntBASIC3.04□□□□□ -1.92
HLA-CQ95604 AC093729.1-201ENST00000513074 128 ntBASIC3.04□□□□□ -1.92
HLA-CQ95604 DEFB122-202ENST00000569013 197 ntBASIC3.04□□□□□ -1.92
HLA-CQ95604 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-CQ95604 AC073325.2-201ENST00000339545 159 ntBASIC3.03□□□□□ -1.92
HLA-CQ95604 SNORD115-37-201ENST00000363768 82 ntBASIC3.03□□□□□ -1.92
HLA-CQ95604 SNORA67.4-201ENST00000384688 142 ntBASIC3.03□□□□□ -1.92
HLA-CQ95604 SNORA3.2-201ENST00000408221 125 ntBASIC3.03□□□□□ -1.92
HLA-CQ95604 RNA5SP501-201ENST00000410990 112 ntBASIC3.03□□□□□ -1.92
HLA-CQ95604 AC012676.2-201ENST00000619258 186 ntBASIC3.03□□□□□ -1.92
HLA-CQ95604 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-CQ95604 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-CQ95604 HSBP1P2-201ENST00000299671 229 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 Y_RNA.94-201ENST00000363068 106 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 RNU6-457P-201ENST00000363999 107 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 RNU6-360P-201ENST00000390944 104 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 RNU6-613P-201ENST00000410412 108 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 RNA5SP148-201ENST00000516527 94 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 AC015712.3-201ENST00000559380 164 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 AL513043.2-201ENST00000573941 143 ntBASIC3.02□□□□□ -1.93
HLA-CQ95604 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-CQ95604 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-CQ95604 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HLA-CQ95604 RNA5SP138-201ENST00000365098 114 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 SNORD38B-201ENST00000384690 67 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 RNU6-482P-201ENST00000391068 107 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 RPL31P63-201ENST00000422565 375 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 RNU1-98P-201ENST00000458992 160 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 MTND5P40-201ENST00000559945 246 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 MIR4712-201ENST00000583750 82 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.01□□□□□ -1.93
HLA-CQ95604 SNORD38B-202ENST00000625943 69 ntBASIC3.01□□□□□ -1.93
HLA-CQ95604 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3□□□□□ -1.93
HLA-CQ95604 RNU1-138P-201ENST00000384093 164 ntBASIC3□□□□□ -1.93
HLA-CQ95604 MIR520C-201ENST00000385005 87 ntBASIC3□□□□□ -1.93
HLA-CQ95604 AC108210.2-201ENST00000503681 201 ntBASIC3□□□□□ -1.93
HLA-CQ95604 RNA5SP380-201ENST00000517190 98 ntBASIC3□□□□□ -1.93
HLA-CQ95604 MIR4738-201ENST00000579134 87 ntBASIC3□□□□□ -1.93
HLA-CQ95604 AC007318.2-201ENST00000620999 243 ntBASIC3□□□□□ -1.93
HLA-CQ95604 GS1-279B7.1-204ENST00000641809 378 ntBASIC3□□□□□ -1.93
HLA-CQ95604 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
HLA-CQ95604 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
HLA-CQ95604 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HLA-CQ95604 AP000648.3-201ENST00000623539 4507 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-CQ95604 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.99□□□□□ -1.93
HLA-CQ95604 RNU6-805P-201ENST00000365643 106 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 RNA5SP247-201ENST00000411181 105 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 AL603825.1-201ENST00000438481 80 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 MIR2276-201ENST00000516886 89 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.99□□□□□ -1.93
HLA-CQ95604 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-CQ95604 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-CQ95604 RNU6-315P-201ENST00000362666 107 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 Y_RNA.168-201ENST00000363740 102 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 RNU6-524P-201ENST00000384270 107 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HLA-CQ95604 RNU6-322P-201ENST00000516010 103 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 AC133485.1-201ENST00000567176 124 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 AP000753.3-201ENST00000604083 169 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.98□□□□□ -1.93
HLA-CQ95604 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms