Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 DNAJC19P9-201ENST00000555084 351 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 AC022523.2-201ENST00000561045 150 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 SNORD114-1-201ENST00000362705 72 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 Y_RNA.49-201ENST00000362714 112 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 Y_RNA.116-201ENST00000363292 103 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 Y_RNA.430-201ENST00000384081 110 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 RNU6-106P-201ENST00000384405 107 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 SNORA26.6-201ENST00000391256 115 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 AL445685.2-201ENST00000422551 342 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 AC004812.1-201ENST00000540773 146 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 RNU6-94P-201ENST00000607728 107 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 AL035470.1-201ENST00000622571 220 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 AC095038.3-201ENST00000634439 195 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 MIR6841-201ENST00000637129 72 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 AL589743.1-201ENST00000551932 2712 ntBASIC2.16□□□□□ -2.06
BRF1Q92994 SNORD115-2-201ENST00000362842 82 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 SNORD115-20-201ENST00000365099 82 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 Y_RNA.531-201ENST00000384589 121 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 MIR548D2-201ENST00000384955 97 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 MIR9-3-201ENST00000385084 90 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.15□□□□□ -2.07
BRF1Q92994 AL020996.3-201ENST00000606617 222 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 MIR6717-201ENST00000622747 73 ntBASIC2.15□□□□□ -2.07
BRF1Q92994 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
BRF1Q92994 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
BRF1Q92994 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
BRF1Q92994 Y_RNA.323-201ENST00000365157 109 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 AC019129.1-201ENST00000403786 261 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 AL512326.2-201ENST00000426359 151 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 AL031737.1-201ENST00000450125 223 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 snoU13.16-201ENST00000459350 104 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 RNU7-45P-201ENST00000459460 63 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 RPL39P34-201ENST00000477141 156 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 RPS27P21-201ENST00000486977 252 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 DEFB122-202ENST00000569013 197 ntBASIC2.14□□□□□ -2.07
BRF1Q92994 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
BRF1Q92994 Y_RNA.299-201ENST00000364973 94 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
BRF1Q92994 RNU6-913P-201ENST00000390913 95 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 RPS23P4-201ENST00000487908 423 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 MIR4764-201ENST00000580680 88 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 uc_338.28-201ENST00000612082 187 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 AC106754.2-201ENST00000623006 233 ntBASIC2.13□□□□□ -2.07
BRF1Q92994 SNORA63.5-201ENST00000363548 123 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 Y_RNA.344-201ENST00000365381 112 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 RNU6-1014P-201ENST00000383940 103 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 SNORA51.10-201ENST00000384418 136 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 RNU6-554P-201ENST00000410466 106 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 RNU6-322P-201ENST00000516010 103 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 MIR4419B-201ENST00000577260 68 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.12□□□□□ -2.07
BRF1Q92994 MIR4287-201ENST00000579398 78 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 MIR8055-201ENST00000610739 97 ntBASIC2.12□□□□□ -2.07
BRF1Q92994 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
BRF1Q92994 SNORA22.1-201ENST00000362701 134 ntBASIC2.11□□□□□ -2.07
BRF1Q92994 MIR513A1-201ENST00000385138 129 ntBASIC2.11□□□□□ -2.07
BRF1Q92994 RNU6-1258P-201ENST00000516911 111 ntBASIC2.11□□□□□ -2.07
BRF1Q92994 SNORA77B-201ENST00000578179 125 ntBASIC2.11□□□□□ -2.07
BRF1Q92994 AC008133.2-201ENST00000624540 351 ntBASIC2.11□□□□□ -2.07
BRF1Q92994 Y_RNA.163-201ENST00000363702 113 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 MIR520C-201ENST00000385005 87 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 SNORA40.18-201ENST00000391200 128 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.1□□□□□ -2.07
BRF1Q92994 RNU7-113P-201ENST00000459273 62 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 AC113410.1-201ENST00000505029 247 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 RNU7-6P-201ENST00000516845 62 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 MIR4299-201ENST00000577899 72 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 MIR5009-201ENST00000578736 100 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 MIR3945-201ENST00000581853 98 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 AC087741.2-201ENST00000619415 172 ntBASIC2.1□□□□□ -2.07
BRF1Q92994 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
BRF1Q92994 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
BRF1Q92994 SNORD115-19-201ENST00000363098 82 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 SNORD115-18-201ENST00000363293 82 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 Y_RNA.171-201ENST00000363760 102 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 SNORD115-17-201ENST00000364612 82 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 Y_RNA.309-201ENST00000365046 111 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 RNU6-439P-201ENST00000384188 106 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 MIR1302-5-201ENST00000408164 150 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 RNU6-1190P-201ENST00000410811 104 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 RNU6-168P-201ENST00000516189 101 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 AC068339.1-201ENST00000526965 141 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 AL513534.2-201ENST00000603836 250 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 MIR8074-201ENST00000615081 81 ntBASIC2.09□□□□□ -2.07
BRF1Q92994 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
BRF1Q92994 MIR450A1-201ENST00000362262 91 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 RNU6-766P-201ENST00000362478 107 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 U8.6-201ENST00000364939 135 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 SNORD48-201ENST00000364953 64 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 RNA5SP259-201ENST00000365541 109 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 RNU6-32P-201ENST00000383948 107 ntBASIC2.08□□□□□ -2.08
BRF1Q92994 RNU6-13P-201ENST00000384248 107 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms