Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MIR889-201ENST00000401280 79 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 SNORA11.4-201ENST00000408823 129 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 AL445685.2-201ENST00000422551 342 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 RPS29P29-201ENST00000456396 171 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 RNU7-67P-201ENST00000459003 62 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 RNU7-2P-201ENST00000516096 62 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 MIR4791-201ENST00000607666 84 ntBASIC2.58□□□□□ -2
SHKBP1Q8TBC3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.58□□□□□ -2
SHKBP1Q8TBC3 SNORD38.1-201ENST00000363863 68 ntBASIC2.57□□□□□ -2
SHKBP1Q8TBC3 SNORD21-201ENST00000383953 95 ntBASIC2.57□□□□□ -2
SHKBP1Q8TBC3 RNU6-913P-201ENST00000390913 95 ntBASIC2.57□□□□□ -2
SHKBP1Q8TBC3 RNU6-1307P-201ENST00000391012 103 ntBASIC2.57□□□□□ -2
SHKBP1Q8TBC3 HSPE1P9-201ENST00000440046 311 ntBASIC2.57□□□□□ -2
SHKBP1Q8TBC3 AL020996.3-201ENST00000606617 222 ntBASIC2.57□□□□□ -2
SHKBP1Q8TBC3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.56□□□□□ -2
SHKBP1Q8TBC3 SNORD115-27-201ENST00000364430 82 ntBASIC2.56□□□□□ -2
SHKBP1Q8TBC3 MIR516B2-201ENST00000385190 85 ntBASIC2.56□□□□□ -2
SHKBP1Q8TBC3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
SHKBP1Q8TBC3 RPS29P12-201ENST00000460178 152 ntBASIC2.56□□□□□ -2
SHKBP1Q8TBC3 RNA5SP168-201ENST00000516642 112 ntBASIC2.56□□□□□ -2
SHKBP1Q8TBC3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHKBP1Q8TBC3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHKBP1Q8TBC3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.55□□□□□ -2
SHKBP1Q8TBC3 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
SHKBP1Q8TBC3 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
SHKBP1Q8TBC3 RNU7-73P-201ENST00000458743 63 ntBASIC2.55□□□□□ -2
SHKBP1Q8TBC3 MIR4712-201ENST00000583750 82 ntBASIC2.55□□□□□ -2
SHKBP1Q8TBC3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 MIR34C-201ENST00000384831 77 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 MIR206-201ENST00000384872 86 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 AL034345.1-201ENST00000407768 123 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.54□□□□□ -2
SHKBP1Q8TBC3 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 RNU7-12P-201ENST00000516030 62 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 AC005786.1-201ENST00000588553 154 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
SHKBP1Q8TBC3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.54□□□□□ -2
SHKBP1Q8TBC3 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 RNU6-524P-201ENST00000384270 107 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 MIR452-201ENST00000385020 85 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 SNORD28B-201ENST00000390993 75 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 RNA5SP425-201ENST00000410336 112 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 RN7SKP223-201ENST00000410582 62 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.53□□□□□ -2
SHKBP1Q8TBC3 AC069114.2-201ENST00000604699 304 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 U4atac.1-201ENST00000618345 95 ntBASIC2.53□□□□□ -2
SHKBP1Q8TBC3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.53□□□□□ -2
SHKBP1Q8TBC3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.53□□□□□ -2
SHKBP1Q8TBC3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
SHKBP1Q8TBC3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2.01
SHKBP1Q8TBC3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-342P-201ENST00000384521 104 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 MIR136-201ENST00000385207 82 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-613P-201ENST00000410412 108 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 AL161932.1-201ENST00000437408 146 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 RPS29P28-201ENST00000446439 141 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 RNU7-35P-201ENST00000517174 62 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 MIR548AR-201ENST00000582191 57 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 AC243994.1-201ENST00000618627 109 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 SNORD3E-202ENST00000627253 216 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 AC016717.2-201ENST00000609089 5141 ntBASIC2.52□□□□□ -2.01
SHKBP1Q8TBC3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 RNA5SP432-201ENST00000362480 116 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-1229P-201ENST00000364295 107 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 Y_RNA.567-201ENST00000384736 106 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 MIR548G-201ENST00000408442 89 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 snoU13.26-201ENST00000459452 105 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 AC026436.1-201ENST00000510537 270 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
SHKBP1Q8TBC3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 AC005336.3-201ENST00000623833 2679 ntBASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 RNU6-457P-201ENST00000363999 107 ntBASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 RPL31P63-201ENST00000422565 375 ntBASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 HMGN1P33-201ENST00000432945 451 ntBASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.5□□□□□ -2.01
SHKBP1Q8TBC3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 SNORD115-3-201ENST00000363100 82 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 Y_RNA.565-201ENST00000384719 101 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 MIR519C-201ENST00000385053 87 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 AL356320.1-201ENST00000429616 163 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 AC093850.1-201ENST00000454121 251 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 RNU1-98P-201ENST00000458992 160 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 snoU13.15-201ENST00000459407 104 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 SNORD123-201ENST00000459473 70 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 AC093729.1-201ENST00000513074 128 ntBASIC2.49□□□□□ -2.01
SHKBP1Q8TBC3 MIR4648-201ENST00000580107 72 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms