Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AL512326.2-201ENST00000426359 151 ntBASIC2.22□□□□□ -2.05
PHC3Q8NDX5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
PHC3Q8NDX5 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
PHC3Q8NDX5 SNORA44.1-201ENST00000517031 108 ntBASIC2.22□□□□□ -2.05
PHC3Q8NDX5 MIR3945-201ENST00000581853 98 ntBASIC2.22□□□□□ -2.05
PHC3Q8NDX5 AL357312.1-201ENST00000603879 298 ntBASIC2.22□□□□□ -2.05
PHC3Q8NDX5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PHC3Q8NDX5 Y_RNA.549-201ENST00000384657 102 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 MT-TI-201ENST00000387365 69 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 MIR1261-201ENST00000408659 82 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 RPS3AP1-201ENST00000413190 320 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 WWP1P1-201ENST00000466609 2769 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 RPS23P4-201ENST00000487908 423 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 SNORD111.1-201ENST00000516421 86 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 RNU7-6P-201ENST00000516845 62 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 AC015688.6-201ENST00000577737 104 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 AL035470.1-201ENST00000622571 220 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 AC064859.1-201ENST00000624741 174 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 MIR4251-201ENST00000635819 61 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 MIR6841-201ENST00000637129 72 ntBASIC2.21□□□□□ -2.06
PHC3Q8NDX5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.116-201ENST00000363292 103 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.354-201ENST00000365448 111 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.2□□□□□ -2.06
PHC3Q8NDX5 AL031737.1-201ENST00000450125 223 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 RNU6-922P-201ENST00000516753 99 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 SNORA77B-201ENST00000578179 125 ntBASIC2.2□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.19□□□□□ -2.06
PHC3Q8NDX5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.19□□□□□ -2.06
PHC3Q8NDX5 RPL39P34-201ENST00000477141 156 ntBASIC2.19□□□□□ -2.06
PHC3Q8NDX5 AC113410.1-201ENST00000505029 247 ntBASIC2.19□□□□□ -2.06
PHC3Q8NDX5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.19□□□□□ -2.06
PHC3Q8NDX5 SNORD115-2-201ENST00000362842 82 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 RNA5SP48-201ENST00000363969 126 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 SNORD115-20-201ENST00000365099 82 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 MIR1302-5-201ENST00000408164 150 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 snoU13.9-201ENST00000458927 103 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 uc_338.28-201ENST00000612082 187 ntBASIC2.18□□□□□ -2.06
PHC3Q8NDX5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PHC3Q8NDX5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
PHC3Q8NDX5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.18□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.309-201ENST00000365046 111 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 RNU6-147P-201ENST00000383983 107 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 MIR30A-201ENST00000385092 71 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 SNORD77B-201ENST00000391112 67 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 RNU4-69P-201ENST00000410677 143 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 HMGN1P33-201ENST00000432945 451 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 RNA5SP33-201ENST00000516687 98 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 CYP3A52P-201ENST00000563326 91 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 MIR8055-201ENST00000610739 97 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 MIR8063-201ENST00000621930 81 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 Z97988.1-201ENST00000637697 135 ntBASIC2.17□□□□□ -2.06
PHC3Q8NDX5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PHC3Q8NDX5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.323-201ENST00000365157 109 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.344-201ENST00000365381 112 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 SNORD41-201ENST00000386967 70 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 RNA5SP425-201ENST00000410336 112 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 RNU7-41P-201ENST00000515917 61 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 MIR1273D-201ENST00000577266 86 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 AC012493.3-201ENST00000604494 112 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 GHRLOS.1-201ENST00000610995 70 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 MIR6873-201ENST00000622788 63 ntBASIC2.16□□□□□ -2.06
PHC3Q8NDX5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PHC3Q8NDX5 Y_RNA.163-201ENST00000363702 113 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 RNU6-1014P-201ENST00000383940 103 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 RNU6-106P-201ENST00000384405 107 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PHC3Q8NDX5 MIR676-201ENST00000390702 67 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 RNA5SP364-201ENST00000516938 78 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 AC068339.1-201ENST00000526965 141 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 MIR3613-201ENST00000579844 87 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 AC103810.8-201ENST00000607347 118 ntBASIC2.15□□□□□ -2.07
PHC3Q8NDX5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PHC3Q8NDX5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
PHC3Q8NDX5 SNORD33-201ENST00000362761 85 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 SNORA70B-201ENST00000384210 135 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 MIR1912-201ENST00000410389 80 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 HSPE1P24-201ENST00000450782 238 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 RPL39P39-201ENST00000455840 151 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 RNU6-250P-201ENST00000516958 103 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 RNU6-94P-201ENST00000607728 107 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 AL162726.3-218ENST00000636401 95 ntBASIC2.14□□□□□ -2.07
PHC3Q8NDX5 U8.2-201ENST00000363156 134 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 RNU6-1113P-201ENST00000384348 107 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 RNU6-554P-201ENST00000410466 106 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 RN7SKP223-201ENST00000410582 62 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 MIR5009-201ENST00000578736 100 ntBASIC2.13□□□□□ -2.07
PHC3Q8NDX5 MIR548AO-201ENST00000579992 96 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms