Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU6-653P-201ENST00000363074 106 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 RNA5SP98-201ENST00000363158 137 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 RNY3-201ENST00000365484 102 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 MIR892B-201ENST00000401279 77 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 MTATP6P26-201ENST00000445926 662 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 FGF7P6-202ENST00000451282 293 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 RNU6-559P-201ENST00000516151 98 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 RNU6-397P-201ENST00000516226 104 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 MIR4662B-201ENST00000579498 81 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 C8orf59P2-201ENST00000603441 271 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 AC084781.2-201ENST00000615568 161 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 AC104985.2-201ENST00000620598 500 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 MIR376A2-201ENST00000636782 80 ntBASIC-0.23□□□□□ -2.45
ZIC4Q8N9L1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 RNU6-403P-201ENST00000363163 104 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 RNU6-102P-201ENST00000384485 104 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 MIR501-201ENST00000390204 84 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 RPL39P25-201ENST00000449384 154 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 SEPT14P8-201ENST00000508026 178 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 MRPS35P2-201ENST00000508242 191 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 AC141846.1-201ENST00000568348 142 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 AC113139.1-201ENST00000605049 239 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 SNORD113-5-201ENST00000607261 78 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 MTND4LP32-201ENST00000636111 270 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 AC073869.6-201ENST00000640656 341 ntBASIC-0.24□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 RNA5SP245-201ENST00000364239 121 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 RNY4P36-201ENST00000391116 96 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 AC108059.2-201ENST00000434626 151 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 HSPE1P25-201ENST00000455484 251 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 SNORA40.14-201ENST00000516543 86 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 AC100767.1-201ENST00000528178 123 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 AP003733.2-201ENST00000529409 171 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 AC138869.1-201ENST00000568623 124 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 AL133255.1-201ENST00000606374 441 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 MIR6841-201ENST00000637129 72 ntBASIC-0.25□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 RNU6-949P-201ENST00000384040 107 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 RNU6-535P-201ENST00000384722 107 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 RNU7-152P-201ENST00000458982 64 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 RNU7-159P-201ENST00000459284 62 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 U8.20-201ENST00000459445 131 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 RNU6-277P-201ENST00000516272 106 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 SNORA25.16-201ENST00000516741 121 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 SNORD116.3-201ENST00000517176 78 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 MIR5692C2-201ENST00000577959 77 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 MIR548AD-201ENST00000584780 82 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 AC092447.9-201ENST00000603395 144 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 AC025253.1-201ENST00000613623 543 ntBASIC-0.26□□□□□ -2.45
ZIC4Q8N9L1 AL596211.1-201ENST00000569873 2277 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 RNU6-484P-201ENST00000384016 107 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 MIR215-201ENST00000384858 110 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 MT-TL1-201ENST00000386347 75 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 AC104692.1-201ENST00000472406 90 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 RNU6-365P-201ENST00000517113 106 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 MIR5589-201ENST00000579442 60 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 MIR4724-201ENST00000579485 89 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 SNORA70.25-201ENST00000612741 95 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 AC133104.2-201ENST00000615272 193 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 AL606534.2-204ENST00000635008 178 ntBASIC-0.27□□□□□ -2.45
ZIC4Q8N9L1 MIR367-201ENST00000362299 68 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 RNU6-726P-201ENST00000364680 107 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 RNU1-115P-201ENST00000365329 160 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 Y_RNA.471-201ENST00000384312 102 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 MIR526A2-201ENST00000390198 65 ntBASIC-0.28□□□□□ -2.45
ZIC4Q8N9L1 RNA5SP237-201ENST00000410414 113 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms