Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 RNU6-47P-201ENST00000383866 107 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.412-201ENST00000384001 104 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 RNU6-643P-201ENST00000384018 107 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 SNORA1-201ENST00000384107 130 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 MIR570-201ENST00000384917 97 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 MIR222-201ENST00000384992 110 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 SNORD77.3-201ENST00000391113 65 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.700-201ENST00000516806 100 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 RNU6-388P-201ENST00000517012 105 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 RNU6-389P-201ENST00000517048 105 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 MIR378D2-201ENST00000580636 98 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 MIR6788-201ENST00000618842 66 ntBASIC1.12□□□□□ -2.23
CCDC13Q8IYE1 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 RNU6-200P-201ENST00000364743 107 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 RNU6-1189P-201ENST00000383958 107 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.440-201ENST00000384120 114 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 SNORA27-201ENST00000384323 126 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 RNU7-73P-201ENST00000458743 63 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 snoU13.16-201ENST00000459350 104 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 RPS29P24-201ENST00000486345 171 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 SNORD116-25-201ENST00000516517 92 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 MIR548AO-201ENST00000579992 96 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 U6.106-201ENST00000636360 105 ntBASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC13Q8IYE1 SNORD114-26-201ENST00000363543 72 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 RNU6-312P-201ENST00000364629 107 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.297-201ENST00000364950 91 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 RNU7-90P-201ENST00000459216 62 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 RNU7-96P-201ENST00000459535 64 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 MIR5197-201ENST00000583721 112 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC13Q8IYE1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.09□□□□□ -2.23
CCDC13Q8IYE1 RNU6-613P-201ENST00000410412 108 ntBASIC1.09□□□□□ -2.23
CCDC13Q8IYE1 RNU6-998P-201ENST00000515894 101 ntBASIC1.09□□□□□ -2.23
CCDC13Q8IYE1 MIR4431-201ENST00000579990 94 ntBASIC1.09□□□□□ -2.23
CCDC13Q8IYE1 AC072026.1-201ENST00000605023 201 ntBASIC1.09□□□□□ -2.23
CCDC13Q8IYE1 MIR376A2-201ENST00000636782 80 ntBASIC1.09□□□□□ -2.23
CCDC13Q8IYE1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC13Q8IYE1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 RNU6-597P-201ENST00000365620 102 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.785-201ENST00000384290 109 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 MIR598-201ENST00000384868 97 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 MT-TN-201ENST00000387400 73 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 AL138752.1-201ENST00000452964 351 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 RNU6-138P-201ENST00000515952 107 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 RNU7-53P-201ENST00000516705 60 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 SNORD114-21-201ENST00000606412 72 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 AC012676.2-201ENST00000619258 186 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 AL391516.1-201ENST00000554380 2449 ntBASIC1.08□□□□□ -2.24
CCDC13Q8IYE1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 MIR377-201ENST00000362145 69 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 RNU6-342P-201ENST00000384521 104 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 MIR624-201ENST00000385217 97 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 AL035398.1-201ENST00000430869 322 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 UBL5P1-201ENST00000507979 193 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 RNU6-113P-201ENST00000516653 101 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 MIR2115-201ENST00000516657 100 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 MIR3129-201ENST00000581095 76 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 MIR8055-201ENST00000610739 97 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 MIR6516-201ENST00000630554 81 ntBASIC1.07□□□□□ -2.24
CCDC13Q8IYE1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 RNU6-396P-201ENST00000365369 105 ntBASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 RNU7-67P-201ENST00000459003 62 ntBASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 RNU7-120P-201ENST00000459334 63 ntBASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 MIR6767-201ENST00000637302 66 ntBASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
CCDC13Q8IYE1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.05□□□□□ -2.24
CCDC13Q8IYE1 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
CCDC13Q8IYE1 RNU6-913P-201ENST00000390913 95 ntBASIC1.05□□□□□ -2.24
CCDC13Q8IYE1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC13Q8IYE1 Z97988.1-201ENST00000637697 135 ntBASIC1.05□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.240-201ENST00000364469 95 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 RNU6-580P-201ENST00000365159 107 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 RNA5SP127-201ENST00000411051 133 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 RNU6-958P-201ENST00000516995 106 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 AC036111.3-201ENST00000526389 112 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 AL020996.3-201ENST00000606617 222 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 AC106800.4-201ENST00000614905 153 ntBASIC1.04□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.03□□□□□ -2.24
CCDC13Q8IYE1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms