Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIR8066-201ENST00000617280 78 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 MIR376A2-201ENST00000636782 80 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 MTND4P29-201ENST00000503122 1372 ntBASIC0.17□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.91-201ENST00000363042 107 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 RNU6-770P-201ENST00000363929 105 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 RNY1-201ENST00000364228 113 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 Y_RNA.389-201ENST00000383924 113 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 MT-TF-201ENST00000387314 71 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 RNU6-504P-201ENST00000516568 104 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 RNU6-448P-201ENST00000517052 107 ntBASIC0.16□□□□□ -2.38
CCDC65Q8IXS2 SNORA25.1-201ENST00000362326 128 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.24-201ENST00000362508 103 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.634-201ENST00000364811 113 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 RNU6-211P-201ENST00000384047 107 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.509-201ENST00000384506 99 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 MIR626-201ENST00000385032 94 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 MT-TD-201ENST00000387419 68 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 RNU6-101P-201ENST00000410323 104 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 RNU2-70P-201ENST00000410718 179 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 MTND4LP30-201ENST00000454092 297 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 RNU6-126P-201ENST00000516685 103 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 AP001282.2-201ENST00000616149 309 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 MIR6717-201ENST00000622747 73 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
CCDC65Q8IXS2 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 AL731563.1-201ENST00000442202 214 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 SNRPGP8-201ENST00000454064 226 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 RNU7-45P-201ENST00000459460 63 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.721-201ENST00000517207 102 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 AC133485.4-201ENST00000561835 220 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 AC097639.2-201ENST00000603159 172 ntBASIC0.14□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.19-201ENST00000362462 99 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.64-201ENST00000362845 102 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.276-201ENST00000364732 109 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 RNU6-597P-201ENST00000365620 102 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.410-201ENST00000383992 113 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 SNORA53-201ENST00000391141 249 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 RNU2-55P-201ENST00000411146 174 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 AC006006.1-201ENST00000603082 144 ntBASIC0.13□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.7-201ENST00000362352 102 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 RNA5SP117-201ENST00000365294 118 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 RNU6-1189P-201ENST00000383958 107 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 SNORA1-201ENST00000384107 130 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.508-201ENST00000384502 114 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 SNORA8.3-201ENST00000384679 139 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 MT-TT-201ENST00000387460 66 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 SNORD71-201ENST00000411292 86 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 AC096949.1-201ENST00000412047 152 ntBASIC0.12□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.84-201ENST00000363011 104 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.152-201ENST00000363578 100 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 SNORA22B-201ENST00000383876 138 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 RNU6-514P-201ENST00000384208 107 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 MIR644A-201ENST00000385262 94 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 RNY3P15-201ENST00000516297 97 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 RNU6-1299P-201ENST00000516316 100 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 SNORA62.5-201ENST00000516634 120 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 SNORA40.15-201ENST00000516884 107 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 AC010487.4-201ENST00000637027 61 ntBASIC0.11□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 snoU2_19.4-201ENST00000364329 80 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.304-201ENST00000365011 112 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.431-201ENST00000384086 102 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 MTND5P22-201ENST00000458380 195 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 SERF1AP1-201ENST00000514575 187 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 RNA5SP153-201ENST00000516498 76 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 AC113195.1-201ENST00000579952 141 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 AC037487.3-201ENST00000606668 112 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 PVT1_3.1-201ENST00000620853 95 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 uc_338.16-201ENST00000621804 95 ntBASIC0.1□□□□□ -2.39
CCDC65Q8IXS2 Y_RNA.117-201ENST00000363294 101 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.210-201ENST00000364161 110 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 RNU5E-4P-201ENST00000364931 120 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 U8.15-201ENST00000390947 134 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 RNU4-83P-201ENST00000410863 133 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 RNU6-1338P-201ENST00000516328 91 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 RNU6-453P-201ENST00000516819 85 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 AL662814.1-201ENST00000617364 121 ntBASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.09□□□□□ -2.4
CCDC65Q8IXS2 MIR342-201ENST00000362212 99 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 RNU6-653P-201ENST00000363074 106 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.158-201ENST00000363651 101 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.08□□□□□ -2.4
CCDC65Q8IXS2 RNY3P5-201ENST00000384127 102 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 303.1 ms