Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-653P-201ENST00000363074 106 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-694P-201ENST00000364071 147 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.277-201ENST00000364754 102 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-934P-201ENST00000365154 107 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU4-17P-201ENST00000365598 141 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-1189P-201ENST00000383958 107 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-381P-201ENST00000391259 108 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 AL138752.1-201ENST00000452964 351 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU7-62P-201ENST00000458856 62 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 RNU7-96P-201ENST00000459535 64 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 MIR4643-201ENST00000577473 78 ntBASIC0.57□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.262-201ENST00000364641 102 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-110P-201ENST00000384508 104 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 RNU2-38P-201ENST00000410856 79 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 SNORD83.1-201ENST00000411362 77 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 HMGN1P33-201ENST00000432945 451 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 RNU2-11P-201ENST00000459191 187 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 AC011195.1-201ENST00000578177 177 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 AL442067.1-201ENST00000613261 223 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 AC022709.1-201ENST00000615967 87 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 MIR6734-201ENST00000621166 68 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 Z97988.1-201ENST00000637697 135 ntBASIC0.56□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.7-201ENST00000362352 102 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-369P-201ENST00000362515 102 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-1309P-201ENST00000363305 108 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 SNORA1.1-201ENST00000364671 133 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.288-201ENST00000364854 92 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-728P-201ENST00000365375 104 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.354-201ENST00000365448 111 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 SNORA1-201ENST00000384107 130 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.440-201ENST00000384120 114 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 SNORD77.3-201ENST00000391113 65 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU1-119P-201ENST00000391122 165 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 SNORA79-201ENST00000408376 140 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 AL358176.2-201ENST00000425769 204 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-998P-201ENST00000515894 101 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-561P-201ENST00000516222 102 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 MIR4771-2-201ENST00000577758 74 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 MIR4771-1-201ENST00000582617 74 ntBASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
C9orf40Q8IXQ3 MIR342-201ENST00000362212 99 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.23-201ENST00000362496 106 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.76-201ENST00000362931 109 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 RNU1-133P-201ENST00000364867 167 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.292-201ENST00000364904 97 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 MIR548I3-201ENST00000408378 149 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 MIR548H3-201ENST00000408771 118 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 AC244098.3-201ENST00000424803 96 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 SNORD127-201ENST00000458892 86 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 COX6CP6-201ENST00000490840 228 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-977P-201ENST00000516411 103 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 AL360085.1-201ENST00000604713 532 ntBASIC0.54□□□□□ -2.32
C9orf40Q8IXQ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-103P-201ENST00000363686 107 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 MIR520F-201ENST00000384824 87 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 RNU6-602P-201ENST00000411155 105 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 AC015818.7-201ENST00000428754 109 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 AC087499.7-201ENST00000441958 109 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 MIR3129-201ENST00000581095 76 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 MIR6740-201ENST00000618268 113 ntBASIC0.53□□□□□ -2.32
C9orf40Q8IXQ3 HSBP1P2-201ENST00000299671 229 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 MIR302B-201ENST00000362188 73 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.542-201ENST00000384641 111 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 MIR588-201ENST00000384900 83 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 RNA5SP222-201ENST00000411039 105 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 RNU6-327P-201ENST00000516270 127 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 AC011921.3-201ENST00000605540 361 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 uc_338.6-201ENST00000613544 171 ntBASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 MIR520H-201ENST00000385126 88 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 RNU4-43P-201ENST00000410628 137 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 RNU6-1132P-201ENST00000459214 107 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 MIR4744-201ENST00000581563 82 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 MIR4804-201ENST00000581683 73 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 MIR4676-201ENST00000583078 72 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 AC010332.2-201ENST00000613083 1904 ntBASIC0.51□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.308-201ENST00000365043 101 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.556-201ENST00000384677 113 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 Y_RNA.562-201ENST00000384695 113 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 MIR1302-3-201ENST00000408128 138 ntBASIC0.5□□□□□ -2.33
C9orf40Q8IXQ3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 318.8 ms