Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MIR520C-201ENST00000385005 87 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 SNORA26.6-201ENST00000391256 115 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-554P-201ENST00000410466 106 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 AL161935.2-201ENST00000414627 60 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 AC244636.1-201ENST00000421152 228 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 JTBP1-201ENST00000441314 247 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 MIR4764-201ENST00000580680 88 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 MIR4448-201ENST00000584360 86 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 MIR6717-201ENST00000622747 73 ntBASIC1.99□□□□□ -2.09
TRIM48Q8IWZ4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 MIR504-201ENST00000385065 83 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 AC019129.1-201ENST00000403786 261 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 RNU7-113P-201ENST00000459273 62 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 MIR3152-201ENST00000579801 74 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 AL020996.3-201ENST00000606617 222 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 AL589743.1-201ENST00000551932 2712 ntBASIC1.98□□□□□ -2.09
TRIM48Q8IWZ4 SNORA22.1-201ENST00000362701 134 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 MIR548D2-201ENST00000384955 97 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 AL031737.1-201ENST00000450125 223 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 RNU7-73P-201ENST00000458743 63 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 MIR4679-2-201ENST00000578358 77 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 MIR3163-201ENST00000581592 73 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 AC008133.2-201ENST00000624540 351 ntBASIC1.97□□□□□ -2.09
TRIM48Q8IWZ4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-1014P-201ENST00000383940 103 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 RNU7-43P-201ENST00000516554 64 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-922P-201ENST00000516753 99 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 MIR4299-201ENST00000577899 72 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.1
TRIM48Q8IWZ4 AL596028.1-201ENST00000326971 197 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RNA5SP89-201ENST00000410300 108 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RPL39P34-201ENST00000477141 156 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RPS23P4-201ENST00000487908 423 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RNU7-41P-201ENST00000515917 61 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-322P-201ENST00000516010 103 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 SNORA77B-201ENST00000578179 125 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 AC131280.1-202ENST00000624067 4211 ntBASIC1.95□□□□□ -2.1
TRIM48Q8IWZ4 U8.6-201ENST00000364939 135 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 AL451046.2-201ENST00000403074 277 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 AL445685.2-201ENST00000422551 342 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 RNA5SP33-201ENST00000516687 98 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 AC068339.1-201ENST00000526965 141 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 AC087741.2-201ENST00000619415 172 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 MIR6841-201ENST00000637129 72 ntBASIC1.94□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-661P-201ENST00000362409 107 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 Y_RNA.49-201ENST00000362714 112 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 Y_RNA.163-201ENST00000363702 113 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 MIR583-201ENST00000384846 75 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 snoU13.16-201ENST00000459350 104 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-168P-201ENST00000516189 101 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 MIR548AO-201ENST00000579992 96 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 Y_RNA.773-201ENST00000607168 90 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 MIR8055-201ENST00000610739 97 ntBASIC1.93□□□□□ -2.1
TRIM48Q8IWZ4 SNORA32-201ENST00000384072 121 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 Y_RNA.495-201ENST00000384435 112 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 RNA5SP261-201ENST00000410536 106 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 AC090844.1-201ENST00000422019 156 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 AC113410.1-201ENST00000505029 247 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR5009-201ENST00000578736 100 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR3124-201ENST00000582636 67 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR548AE2-201ENST00000583456 67 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR5002-201ENST00000584713 97 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR8074-201ENST00000615081 81 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR4251-201ENST00000635819 61 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TRIM48Q8IWZ4 SNORA1.1-201ENST00000364671 133 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-756P-201ENST00000383997 107 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 SNORA51.5-201ENST00000384126 131 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 MIR1302-5-201ENST00000408164 150 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 RPS3AP1-201ENST00000413190 320 ntBASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.91□□□□□ -2.1
TRIM48Q8IWZ4 RNU6-893P-201ENST00000458841 100 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms