Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 SNORD53B-201ENST00000577887 78 ntBASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 Y_RNA.757-201ENST00000578934 114 ntBASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 MIR548AI-201ENST00000579940 88 ntBASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 AL096840.1-201ENST00000603287 93 ntBASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 AL512598.1-201ENST00000610158 273 ntBASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 AL359851.1-201ENST00000569460 4997 ntBASIC1.6□□□□□ -2.15
SFTPA1Q8IWL2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 RNU6-735P-201ENST00000410612 107 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 RNU2-40P-201ENST00000410833 196 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 RPS29P24-201ENST00000486345 171 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 RNU6-772P-201ENST00000516042 105 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 RNU6-659P-201ENST00000516454 104 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 RNU6-958P-201ENST00000516995 106 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 AC019176.1-201ENST00000518519 225 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 AC091932.4-201ENST00000623386 200 ntBASIC1.59□□□□□ -2.15
SFTPA1Q8IWL2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
SFTPA1Q8IWL2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
SFTPA1Q8IWL2 RNU1-133P-201ENST00000364867 167 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 MIR520C-201ENST00000385005 87 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 MIR1287-201ENST00000408492 90 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 Y_RNA.630-201ENST00000411370 108 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 AL158147.1-201ENST00000443970 75 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 RNU7-67P-201ENST00000459003 62 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 RNU7-80P-201ENST00000459562 61 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-781P-201ENST00000516377 101 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 IGKV1-22-201ENST00000524313 326 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SFTPA1Q8IWL2 RNA5SP205-201ENST00000364653 136 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 SNORD41-201ENST00000386967 70 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 RNU2-11P-201ENST00000459191 187 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-998P-201ENST00000515894 101 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-1061P-201ENST00000516530 99 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 MIR4764-201ENST00000580680 88 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 HSPE1P19-201ENST00000603327 295 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 MIR4791-201ENST00000607666 84 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 AC243994.1-201ENST00000618627 109 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
SFTPA1Q8IWL2 MIR302B-201ENST00000362188 73 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 SNORA67.6-201ENST00000391093 99 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 AL035398.1-201ENST00000430869 322 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 RPS29P29-201ENST00000456396 171 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 RNU7-96P-201ENST00000459535 64 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-947P-201ENST00000516264 106 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 RNU7-43P-201ENST00000516554 64 ntBASIC1.56□□□□□ -2.16
SFTPA1Q8IWL2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AL391516.1-201ENST00000554380 2449 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 MIR302D-201ENST00000362275 68 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU4-16P-201ENST00000364737 141 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 Y_RNA.454-201ENST00000384224 113 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU7-45P-201ENST00000459460 63 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AC079140.2-201ENST00000506193 142 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU2-13P-201ENST00000515909 113 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU7-41P-201ENST00000515917 61 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-240P-201ENST00000516098 97 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 SNORD111.1-201ENST00000516421 86 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AC133485.4-201ENST00000561835 220 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AC138907.4-201ENST00000570107 226 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AC024614.2-201ENST00000577584 372 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 MIR3937-201ENST00000580135 106 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AL513534.2-201ENST00000603836 250 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 AC008133.2-201ENST00000624540 351 ntBASIC1.55□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-690P-201ENST00000365242 106 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 Y_RNA.366-201ENST00000365540 102 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 SNORA70.7-201ENST00000384159 133 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 SNORA51.10-201ENST00000384418 136 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 SNORA31.4-201ENST00000516049 129 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 AL359881.1-201ENST00000602916 267 ntBASIC1.54□□□□□ -2.16
SFTPA1Q8IWL2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 SNORD58C-201ENST00000365223 64 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 RNY1P6-201ENST00000384193 109 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 AL354695.1-201ENST00000427935 228 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 AC009474.2-201ENST00000451383 136 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 RN7SKP19-201ENST00000516016 252 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 SNORD33.1-201ENST00000516213 88 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.53□□□□□ -2.16
SFTPA1Q8IWL2 RNU6-349P-201ENST00000362402 107 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-647P-201ENST00000364243 107 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 RNU6-913P-201ENST00000390913 95 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 Y_RNA.617-201ENST00000410920 90 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 RNU7-53P-201ENST00000516705 60 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 MIR3198-2-201ENST00000577868 80 ntBASIC1.52□□□□□ -2.17
SFTPA1Q8IWL2 MIR4421-201ENST00000578133 69 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms