Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNORA1.2-201ENST00000365189 134 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 Y_RNA.558-201ENST00000384685 113 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 MIR452-201ENST00000385020 85 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 AL022718.1-201ENST00000412004 84 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 RNU2-11P-201ENST00000459191 187 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 RNU7-12P-201ENST00000516030 62 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
VRK3Q8IV63 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
VRK3Q8IV63 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VRK3Q8IV63 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 Y_RNA.299-201ENST00000364973 94 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 MIR520A-201ENST00000384862 85 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VRK3Q8IV63 SNORA26.6-201ENST00000391256 115 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 HMGN2P39-201ENST00000398005 273 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 RPL39P25-201ENST00000449384 154 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 RNU6-893P-201ENST00000458841 100 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 AC107297.1-201ENST00000459991 176 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 AC113410.1-201ENST00000505029 247 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 RNU6-1258P-201ENST00000516911 111 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 RNA5SP437-201ENST00000517249 129 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 AC141557.1-201ENST00000540982 400 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 Y_RNA.773-201ENST00000607168 90 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 MIR6841-201ENST00000637129 72 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.89□□□□□ -2.11
VRK3Q8IV63 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VRK3Q8IV63 AC245060.5-201ENST00000610778 3293 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
VRK3Q8IV63 SNORD114-1-201ENST00000362705 72 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 RNU6-363P-201ENST00000362895 105 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 Y_RNA.370-201ENST00000365589 108 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 MIR504-201ENST00000385065 83 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 MIR136-201ENST00000385207 82 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 AC099513.1-201ENST00000490423 301 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 RNU6-762P-201ENST00000517107 102 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 AC021506.2-201ENST00000612354 169 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 AL442128.1-201ENST00000615151 90 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 AL513423.1-201ENST00000621695 132 ntBASIC1.88□□□□□ -2.11
VRK3Q8IV63 Y_RNA.171-201ENST00000363760 102 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 Y_RNA.388-201ENST00000383919 113 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 Y_RNA.430-201ENST00000384081 110 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 RNY4P29-201ENST00000410801 97 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 RNU7-73P-201ENST00000458743 63 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 RNU7-45P-201ENST00000459460 63 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 SCARNA23-201ENST00000516060 130 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 DEFB131E-201ENST00000532329 154 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 MALAT1.1-201ENST00000618249 95 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
VRK3Q8IV63 MIR1255B1-201ENST00000636325 63 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 AP006437.1-201ENST00000641440 3685 ntBASIC1.87□□□□□ -2.11
VRK3Q8IV63 RNU4-36P-201ENST00000364294 144 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 SNORA70.7-201ENST00000384159 133 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 RNY1P7-201ENST00000384743 110 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 MIR516B2-201ENST00000385190 85 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 MIR660-201ENST00000385235 97 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VRK3Q8IV63 Y_RNA.601-201ENST00000410500 113 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 RNU4-69P-201ENST00000410677 143 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 AC096949.1-201ENST00000412047 152 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 AL353813.1-201ENST00000440700 253 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 RPS29P29-201ENST00000456396 171 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 snoU13.15-201ENST00000459407 104 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 RNU7-53P-201ENST00000516705 60 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 MIR4694-201ENST00000578534 80 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 MIR3152-201ENST00000579801 74 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 MIR4524B-201ENST00000581569 115 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 MIR548AR-201ENST00000582191 57 ntBASIC1.86□□□□□ -2.11
VRK3Q8IV63 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 RNY3P2-201ENST00000362918 102 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 Y_RNA.220-201ENST00000364244 109 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 Y_RNA.342-201ENST00000365352 113 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 Y_RNA.507-201ENST00000384500 99 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 MIR526A1-201ENST00000384897 85 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 SNORA26.2-201ENST00000390922 122 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 MIR1270-201ENST00000459320 83 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 RNA5SP57-201ENST00000459463 123 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 RNA5SP481-201ENST00000516814 122 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 DNAJC19P9-201ENST00000555084 351 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
VRK3Q8IV63 SNORA22.1-201ENST00000362701 134 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 Y_RNA.107-201ENST00000363190 121 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 RNU6-832P-201ENST00000363319 107 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 Y_RNA.360-201ENST00000365512 102 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 MIR577-201ENST00000385196 96 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 RNA5SP261-201ENST00000410536 106 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 RNU7-113P-201ENST00000459273 62 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 SNORD123-201ENST00000459473 70 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 RNU6-958P-201ENST00000516995 106 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 SNORD14A-201ENST00000606526 91 ntBASIC1.84□□□□□ -2.11
VRK3Q8IV63 AL020996.3-201ENST00000606617 222 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms